Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | K6J63_RS09940 | Genome accession | NZ_AP018765 |
| Coordinates | 1963472..1963819 (-) | Length | 115 a.a. |
| NCBI ID | WP_005690826.1 | Uniprot ID | Q4QLQ4 |
| Organism | Haemophilus influenzae strain CHBN-II-2 isolate 12H49 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1958472..1968819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J63_RS09920 (CHBNII2_19080) | bioB | 1958861..1959862 (-) | 1002 | WP_005655985.1 | biotin synthase BioB | - |
| K6J63_RS09925 (CHBNII2_19090) | thiQ | 1959975..1960622 (-) | 648 | WP_038441405.1 | thiamine ABC transporter ATP-binding protein | - |
| K6J63_RS09930 (CHBNII2_19100) | thiP | 1960606..1962222 (-) | 1617 | WP_011272346.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| K6J63_RS09935 (CHBNII2_19110) | thiB | 1962227..1963225 (-) | 999 | WP_011272345.1 | thiamine ABC transporter substrate binding subunit | - |
| K6J63_RS09940 (CHBNII2_19120) | comE1/comEA | 1963472..1963819 (-) | 348 | WP_005690826.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| K6J63_RS09945 (CHBNII2_19130) | ispH | 1963989..1964933 (-) | 945 | WP_005659294.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| K6J63_RS09950 (CHBNII2_19140) | lspA | 1964930..1965445 (-) | 516 | WP_038441408.1 | signal peptidase II | - |
| K6J63_RS09955 (CHBNII2_19150) | - | 1965515..1967074 (-) | 1560 | WP_038441409.1 | phosphoethanolamine transferase | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12479.38 Da Isoelectric Point: 8.0084
>NTDB_id=70774 K6J63_RS09940 WP_005690826.1 1963472..1963819(-) (comE1/comEA) [Haemophilus influenzae strain CHBN-II-2 isolate 12H49]
MKLMKTLFTSFVLCGSLAAGSTFAEDKVVEQTTQAVVTTQTDSQVAPAMMGDKLNINIATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNVEQLLEVQGIGKATLEKNRDRIIF
MKLMKTLFTSFVLCGSLAAGSTFAEDKVVEQTTQAVVTTQTDSQVAPAMMGDKLNINIATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNVEQLLEVQGIGKATLEKNRDRIIF
Nucleotide
Download Length: 348 bp
>NTDB_id=70774 K6J63_RS09940 WP_005690826.1 1963472..1963819(-) (comE1/comEA) [Haemophilus influenzae strain CHBN-II-2 isolate 12H49]
ATGAAATTAATGAAAACATTATTCACTTCGTTTGTATTGTGTGGGTCACTTGCAGCTGGTTCCACTTTTGCTGAAGACAA
GGTGGTTGAGCAAACAACTCAAGCTGTTGTGACCACTCAAACGGATTCACAAGTAGCACCAGCTATGATGGGAGATAAAT
TGAATATTAACATAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGTAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
ATGAAATTAATGAAAACATTATTCACTTCGTTTGTATTGTGTGGGTCACTTGCAGCTGGTTCCACTTTTGCTGAAGACAA
GGTGGTTGAGCAAACAACTCAAGCTGTTGTGACCACTCAAACGGATTCACAAGTAGCACCAGCTATGATGGGAGATAAAT
TGAATATTAACATAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGTAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
81.25 |
97.391 |
0.791 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
57.944 |
93.043 |
0.539 |
| comEA | Vibrio campbellii strain DS40M4 |
38.393 |
97.391 |
0.374 |