Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | H7679_RS00325 | Genome accession | NZ_AP023392 |
| Coordinates | 54489..55490 (+) | Length | 333 a.a. |
| NCBI ID | WP_004195448.1 | Uniprot ID | A0A0H3MST2 |
| Organism | Streptococcus suis strain DAT300 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 49489..60490
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7679_RS00295 (DAT300_00410) | - | 49594..50172 (+) | 579 | WP_024395318.1 | CPBP family intramembrane glutamic endopeptidase | - |
| H7679_RS00300 (DAT300_00420) | - | 50187..50615 (+) | 429 | WP_024395317.1 | Msa family membrane protein | - |
| H7679_RS00305 (DAT300_00430) | - | 50608..51480 (+) | 873 | WP_024395316.1 | ABC transporter ATP-binding protein | - |
| H7679_RS00310 (DAT300_00440) | - | 51486..52256 (+) | 771 | WP_024395315.1 | membrane protein | - |
| H7679_RS00315 (DAT300_00450) | - | 52259..53971 (+) | 1713 | WP_063725142.1 | ABC transporter ATP-binding protein | - |
| H7679_RS00320 (DAT300_00460) | - | 54072..54245 (+) | 174 | WP_014637276.1 | hypothetical protein | - |
| H7679_RS00325 (DAT300_00470) | ruvB | 54489..55490 (+) | 1002 | WP_004195448.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| H7679_RS00330 (DAT300_00480) | - | 55490..56236 (+) | 747 | WP_024395313.1 | GNAT family N-acetyltransferase | - |
| H7679_RS00335 (DAT300_00490) | - | 56238..56861 (+) | 624 | WP_024395312.1 | HAD-IA family hydrolase | - |
| H7679_RS00340 (DAT300_00500) | comR | 56966..57865 (+) | 900 | WP_015646238.1 | helix-turn-helix domain-containing protein | Regulator |
| H7679_RS00345 (DAT300_00510) | - | 58072..59292 (+) | 1221 | WP_024395311.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37613.12 Da Isoelectric Point: 4.4673
>NTDB_id=70697 H7679_RS00325 WP_004195448.1 54489..55490(+) (ruvB) [Streptococcus suis strain DAT300]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK
Nucleotide
Download Length: 1002 bp
>NTDB_id=70697 H7679_RS00325 WP_004195448.1 54489..55490(+) (ruvB) [Streptococcus suis strain DAT300]
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCTGTCGGTCTTAACACCCTGTCGGTCAATATCGCTGAAGAGCGTGAAA
CAGTGGAAGACATGTACGAACCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACGCGGACAGGTCGGGTCGCGACAGCT
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCTGTCGGTCTTAACACCCTGTCGGTCAATATCGCTGAAGAGCGTGAAA
CAGTGGAAGACATGTACGAACCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACGCGGACAGGTCGGGTCGCGACAGCT
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Streptococcus pneumoniae TIGR4 |
90.332 |
99.399 |
0.898 |
| ruvB | Streptococcus pneumoniae R6 |
90.03 |
99.399 |
0.895 |
| ruvB | Streptococcus pneumoniae D39 |
90.03 |
99.399 |
0.895 |
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
58.589 |
97.898 |
0.574 |
| ruvB | Helicobacter pylori 26695 |
51.064 |
98.799 |
0.505 |
| ruvB | Synechocystis sp. PCC 6803 |
50.479 |
93.994 |
0.474 |