Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PF977_RS17025 Genome accession   NZ_CP116012
Coordinates   3233273..3234016 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain SRCM124333     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3228273..3239016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS17005 (PF977_17005) - 3228653..3230044 (+) 1392 WP_072692642.1 hypothetical protein -
  PF977_RS17010 (PF977_17010) sndC 3230116..3231306 (+) 1191 WP_064911664.1 N-acetyl amino acid acetylase SndC -
  PF977_RS17015 (PF977_17015) ecsC 3231324..3232034 (-) 711 WP_049140675.1 EcsC family protein -
  PF977_RS17020 (PF977_17020) ecsB 3232054..3233280 (-) 1227 WP_049140674.1 ABC transporter permease EcsB -
  PF977_RS17025 (PF977_17025) pptA 3233273..3234016 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  PF977_RS17030 (PF977_17030) hinT 3234504..3234941 (+) 438 WP_003233231.1 HIT family protein -
  PF977_RS17035 (PF977_17035) serC 3235088..3236167 (+) 1080 WP_015715603.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  PF977_RS17040 (PF977_17040) trpP 3236292..3236810 (+) 519 WP_015715602.1 tryptophan transporter TrpP -
  PF977_RS17045 (PF977_17045) - 3236884..3237075 (-) 192 WP_014476318.1 hypothetical protein -
  PF977_RS17050 (PF977_17050) yhaH 3237205..3237561 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  PF977_RS17055 (PF977_17055) scoC 3237739..3238350 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  PF977_RS17060 (PF977_17060) yhaI 3238347..3238688 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=706945 PF977_RS17025 WP_003233230.1 3233273..3234016(-) (pptA) [Bacillus subtilis strain SRCM124333]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=706945 PF977_RS17025 WP_003233230.1 3233273..3234016(-) (pptA) [Bacillus subtilis strain SRCM124333]
ATGTCTCTGCTATCGGTAAAAGACTTAACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTGATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAGCGGATGAATGAAGCGAAAAAGGGCGGGGCGAGCGT
GCTGATGTCAACGCACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547