Detailed information NTG0070068

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ALSL_RS11475
• Genome accession: NZ_AP018560
• Coordinates: 2455371..2456765 (+)
• Length: 464 a.a.
• NCBI ID: WP_126539295.1
• Uniprot ID: -
• Organism: Aerosticca soli strain Dysh456
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2450371..2461765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ALSL_RS11460 (ALSL_2304)	sucD	2451202..2452074 (-)	873	WP_126539289.1	succinate--CoA ligase subunit alpha	-
ALSL_RS11465 (ALSL_2305)	sucC	2452162..2453322 (-)	1161	WP_126539291.1	ADP-forming succinate--CoA ligase subunit beta	-
ALSL_RS11470 (ALSL_2306)	-	2453636..2455291 (+)	1656	WP_231700222.1	ATP-binding protein	-
ALSL_RS11475 (ALSL_2307)	pilR	2455371..2456765 (+)	1395	WP_126539295.1	sigma-54 dependent transcriptional regulator	Regulator
ALSL_RS11480 (ALSL_2308)	-	2456982..2458547 (-)	1566	WP_174928848.1	response regulator	-
ALSL_RS11485 (ALSL_2309)	-	2458587..2459033 (-)	447	WP_126539299.1	response regulator	-
ALSL_RS11490 (ALSL_2310)	-	2459030..2460907 (-)	1878	WP_231700223.1	ATP-binding protein	-
ALSL_RS11495 (ALSL_2311)	ssb	2461012..2461509 (-)	498	WP_126539301.1	single-stranded DNA-binding protein	Machinery gene

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 50291.89 Da
• Isoelectric Point: 6.7734

>NTDB_id=70068 ALSL_RS11475 WP_126539295.1 2455371..2456765(+) (pilR) [Aerosticca soli strain Dysh456]
MSQQSVLVVDDECDIRELLTITLGRMDLSVRAVGTLAEARQSLAERGFDLCFTDMRLPDGSGQTLVELIAAQHPETPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIAMLRRLVRTALKLAEERRGAGQEPAARGDERLVGDSPAMQQVRIAIGKLARN
QAPVYIAGESGVGKELVARLIHEQGPRAAGPFVPVNCGAIPAELMESEFFGHRRGSFTGAHADKEGLFQAAHGGTLFLDE
VAELPLHMQVKLLRAIQEKAVRPIGAREEVPVDVRILSATHKNLAALVEQGQFRQDLFYRINVIELRVPPLRERRGDVPR
LAAHILRQLAAKNGTPPGRLTQEALQALEAYDFPGNVRELENILERAMAMCEGEEITVADLMLPQRSAAPTAPASATPAT
AATVTPVDAAGVPGVPLEDYISHLERSAIIKALEESRYNKTAAARKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1395 bp

>NTDB_id=70068 ALSL_RS11475 WP_126539295.1 2455371..2456765(+) (pilR) [Aerosticca soli strain Dysh456]
ATGAGTCAACAATCCGTCCTGGTCGTCGACGACGAATGCGACATCCGCGAATTGCTGACCATCACGCTCGGGCGGATGGA
TCTCTCGGTACGCGCGGTCGGCACCCTCGCGGAAGCCAGGCAGTCGCTCGCCGAACGCGGCTTCGACCTCTGCTTTACCG
ACATGCGACTGCCCGACGGCAGCGGCCAGACGCTCGTCGAACTCATCGCCGCGCAGCATCCGGAAACGCCGGTGGCGATG
ATCACCGCCTACGGCAACGTCGATGCCGCGGTCAACGCGCTCAAGGCCGGCGCCTTCGACTTCGTCTCCAAGCCGGTCGA
CATCGCCATGCTGCGCCGGCTGGTACGTACGGCGCTCAAGCTGGCCGAGGAACGCCGCGGCGCCGGCCAGGAACCGGCCG
CCCGCGGCGACGAGCGCCTGGTGGGCGATTCGCCGGCCATGCAGCAGGTGCGGATCGCGATCGGCAAGCTCGCGCGCAAC
CAGGCGCCGGTGTACATCGCCGGCGAATCGGGCGTCGGCAAGGAGCTGGTCGCCCGGCTCATCCACGAGCAGGGCCCGCG
CGCGGCCGGGCCGTTCGTGCCGGTCAACTGCGGCGCGATTCCCGCCGAACTCATGGAAAGCGAGTTCTTCGGCCACCGCC
GCGGTAGCTTCACCGGCGCGCATGCGGACAAGGAGGGCCTGTTCCAGGCCGCCCACGGCGGCACGCTGTTTCTCGACGAG
GTCGCCGAGCTGCCGCTGCACATGCAGGTCAAGCTCTTGCGTGCGATCCAGGAAAAGGCGGTGCGCCCGATCGGTGCGCG
GGAGGAAGTGCCGGTCGACGTGCGCATCCTCTCGGCCACGCACAAGAACCTCGCCGCCCTGGTCGAACAGGGCCAGTTCC
GCCAAGATCTGTTCTACCGCATCAACGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGGCGCGGCGACGTGCCCCGG
CTGGCGGCCCACATCCTGCGCCAGCTCGCCGCCAAGAACGGCACGCCGCCGGGACGGCTCACCCAGGAAGCGTTGCAGGC
GCTCGAGGCCTACGATTTTCCGGGCAATGTGCGCGAGCTCGAAAACATCCTCGAGCGCGCGATGGCGATGTGCGAGGGTG
AGGAAATCACCGTCGCCGACCTCATGCTGCCGCAGCGCAGCGCCGCGCCGACGGCCCCTGCCAGCGCCACGCCCGCGACG
GCCGCCACCGTGACGCCGGTGGATGCCGCCGGCGTGCCCGGCGTCCCGCTCGAGGACTACATCAGCCACCTCGAACGCAG
CGCCATCATCAAGGCGCTGGAAGAGTCGCGCTACAACAAGACCGCGGCGGCACGCAAGCTCGGCATCACCTTCCGCGCGC
TGCGCTACAAGCTGAAAAAGCTCGGTATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (424-461)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.578	100	0.636
pilR	Acinetobacter baumannii strain A118	49.458	99.353	0.491