Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SA27298_RS09610 Genome accession   NZ_AP018548
Coordinates   1954536..1955303 (+) Length   255 a.a.
NCBI ID   WP_003032028.1    Uniprot ID   A0A2T0FRM2
Organism   Streptococcus anginosus strain CCUG 27928     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1949536..1960303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS09580 (SA27298_1949) comE 1950098..1950847 (-) 750 WP_018543656.1 competence system response regulator transcription factor ComE Regulator
  SA27298_RS09585 (SA27298_1950) comD/comD2 1950847..1952172 (-) 1326 WP_211209167.1 GHKL domain-containing protein Regulator
  SA27298_RS09590 (SA27298_1951) - 1952190..1952336 (-) 147 WP_003029519.1 bacteriocin -
  SA27298_RS09600 (SA27298_1953) rlmH 1952618..1953097 (-) 480 WP_003032032.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SA27298_RS09605 (SA27298_1954) htrA 1953291..1954481 (+) 1191 WP_003032033.1 trypsin-like peptidase domain-containing protein Regulator
  SA27298_RS09610 (SA27298_1955) spo0J 1954536..1955303 (+) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29589.02 Da        Isoelectric Point: 8.6965

>NTDB_id=70015 SA27298_RS09610 WP_003032028.1 1954536..1955303(+) (spo0J) [Streptococcus anginosus strain CCUG 27928]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSEQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=70015 SA27298_RS09610 WP_003032028.1 1954536..1955303(+) (spo0J) [Streptococcus anginosus strain CCUG 27928]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGTTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTTCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTGCATTCCCAACAGACAAAAACTGTAACAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTGAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2T0FRM2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541


Multiple sequence alignment