Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   SA27298_RS02695 Genome accession   NZ_AP018548
Coordinates   537230..538261 (+) Length   343 a.a.
NCBI ID   WP_018543438.1    Uniprot ID   A0A3S4M1H1
Organism   Streptococcus anginosus strain CCUG 27928     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 532230..543261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS02680 (SA27298_0552) - 533486..534193 (+) 708 WP_003031845.1 glucosamine-6-phosphate deaminase -
  SA27298_RS02685 (SA27298_0553) - 534310..535686 (+) 1377 WP_003031862.1 DUF1958 domain-containing protein -
  SA27298_RS02690 (SA27298_0554) - 535764..536933 (+) 1170 WP_003031874.1 MFS transporter -
  SA27298_RS02695 (SA27298_0555) coiA 537230..538261 (+) 1032 WP_018543438.1 competence protein CoiA family protein Machinery gene
  SA27298_RS02700 (SA27298_0556) pepF 538213..540015 (+) 1803 WP_003031896.1 oligoendopeptidase F Regulator
  SA27298_RS02705 (SA27298_0557) - 540017..540700 (+) 684 WP_003031902.1 O-methyltransferase -
  SA27298_RS02710 (SA27298_0558) prsA 540807..541745 (+) 939 WP_003031860.1 peptidylprolyl isomerase PrsA -
  SA27298_RS02715 (SA27298_0559) - 541883..542452 (+) 570 WP_080559883.1 LURP-one-related family protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 40787.09 Da        Isoelectric Point: 9.4399

>NTDB_id=69968 SA27298_RS02695 WP_018543438.1 537230..538261(+) (coiA) [Streptococcus anginosus strain CCUG 27928]
MLMACQENGKMLNAVEDRVNPPGRFLCPACKEAVRFKNGKVMRPHFAHISLKECHFYTENESAEHLNLKAALFTWARKSN
HAIQVEAYLPELQQIADLLVEKQIVLEVQCSSLSQKRLKERTESYRQHGYRVLWLLGKKLWLKNTLTNLQKDFLYFSQNM
GFHMWELDEQKQLLRLKYLIHEDLHGKVQYKEKSFAFGKGNLLDIFRQPFCKQEMTSFLAKEDKNICSYVRQQLYYQQPK
WMKWQAELYQTGDNLLTKTASDFYPQVQPVRSSSFCQIFQDLTPYYQQFSAYYEKEKNKNLQILYPPAFYAKIFGNIYDR
IGRTEEILWQNKEMKLKKNTLGT

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=69968 SA27298_RS02695 WP_018543438.1 537230..538261(+) (coiA) [Streptococcus anginosus strain CCUG 27928]
ATGTTAATGGCTTGTCAGGAAAACGGAAAAATGCTAAATGCTGTGGAAGATAGGGTAAATCCACCGGGTAGGTTTCTCTG
CCCGGCTTGTAAGGAAGCGGTGCGATTTAAAAATGGCAAGGTGATGCGACCGCATTTTGCTCATATTTCTTTAAAAGAAT
GTCATTTTTATACGGAAAATGAAAGCGCAGAACACTTGAATTTGAAAGCTGCTTTGTTTACTTGGGCTAGAAAATCCAAT
CATGCGATTCAAGTAGAAGCTTATTTACCAGAATTGCAGCAAATCGCAGATTTGTTAGTTGAAAAACAAATTGTGCTTGA
AGTTCAGTGTAGCTCACTTAGTCAAAAACGCTTAAAAGAGCGTACGGAAAGTTATCGTCAGCATGGCTATCGCGTTCTTT
GGCTCTTGGGAAAGAAACTTTGGCTGAAAAATACTTTGACCAATTTACAAAAGGATTTTCTCTATTTCAGTCAAAATATG
GGCTTTCATATGTGGGAATTGGACGAACAAAAACAGCTTTTGAGGCTTAAATACTTGATTCATGAAGATTTGCATGGCAA
GGTTCAGTATAAGGAGAAAAGTTTTGCTTTTGGTAAAGGAAACCTTTTAGACATCTTTCGTCAGCCATTCTGCAAGCAGG
AAATGACGAGTTTTCTGGCAAAAGAAGATAAAAATATTTGCAGTTATGTGCGCCAGCAGCTCTACTATCAGCAGCCCAAA
TGGATGAAATGGCAGGCAGAATTGTATCAAACGGGTGATAATTTATTAACCAAAACGGCTAGTGACTTTTATCCGCAAGT
CCAACCTGTTCGTTCCAGCTCTTTCTGTCAGATTTTTCAGGATCTCACGCCTTATTACCAGCAATTTTCAGCTTATTATG
AAAAAGAAAAAAATAAAAATCTTCAAATTCTCTATCCTCCAGCCTTTTATGCAAAGATTTTTGGCAATATTTATGATAGA
ATAGGAAGGACGGAGGAAATTTTATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3S4M1H1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

53.503

91.545

0.49

  coiA Streptococcus pneumoniae Rx1

53.185

91.545

0.487

  coiA Streptococcus pneumoniae D39

53.185

91.545

0.487

  coiA Streptococcus pneumoniae R6

53.185

91.545

0.487

  coiA Streptococcus pneumoniae TIGR4

52.866

91.545

0.484

  coiA Lactococcus lactis subsp. cremoris KW2

45.062

94.461

0.426


Multiple sequence alignment