Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NDR85_RS15990 Genome accession   NZ_CP098738
Coordinates   3156311..3158620 (-) Length   769 a.a.
NCBI ID   WP_263870718.1    Uniprot ID   -
Organism   Bacillus halotolerans strain XE48     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3151311..3163620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDR85_RS15950 (NDR85_15910) - 3151778..3152209 (+) 432 WP_044158935.1 Na(+)/H(+) antiporter subunit B -
  NDR85_RS15955 (NDR85_15915) - 3152209..3152550 (+) 342 WP_044158938.1 Na(+)/H(+) antiporter subunit C -
  NDR85_RS15960 (NDR85_15920) - 3152543..3154024 (+) 1482 WP_044158939.1 Na+/H+ antiporter subunit D -
  NDR85_RS15965 (NDR85_15925) - 3154030..3154506 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  NDR85_RS15970 (NDR85_15930) - 3154506..3154790 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  NDR85_RS15975 (NDR85_15935) mnhG 3154774..3155148 (+) 375 WP_044158942.1 monovalent cation/H(+) antiporter subunit G -
  NDR85_RS15980 (NDR85_15940) - 3155188..3155568 (-) 381 WP_044158943.1 hotdog fold thioesterase -
  NDR85_RS15985 (NDR85_15945) comA 3155586..3156230 (-) 645 WP_044158945.1 two-component system response regulator ComA Regulator
  NDR85_RS15990 (NDR85_15950) comP 3156311..3158620 (-) 2310 WP_263870718.1 two-component system sensor histidine kinase ComP Regulator
  NDR85_RS15995 (NDR85_15955) comX 3158636..3158803 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  NDR85_RS16000 (NDR85_15960) comQ 3158787..3159692 (-) 906 WP_044160315.1 polyprenyl synthetase family protein Regulator
  NDR85_RS16005 (NDR85_15965) degQ 3159877..3160017 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  NDR85_RS16010 (NDR85_15970) - 3160478..3160846 (+) 369 WP_044158947.1 hypothetical protein -
  NDR85_RS16015 (NDR85_15975) - 3160822..3162051 (-) 1230 WP_263870719.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89357.97 Da        Isoelectric Point: 8.3598

>NTDB_id=697575 NDR85_RS15990 WP_263870718.1 3156311..3158620(-) (comP) [Bacillus halotolerans strain XE48]
MKNLIKKFTLTVIVMSVLYVCYITYISMNGIIIGTKVQKNHKNQFVIEEISESSYGQFVGLRTGDIILKINEEKPSEKHL
KWGYLSHINSLDILRYGKKIHLEDFDLVTLNRTYSFFLFVLPLVFYFLSIICIFYILKVSKVRKSFAGYILVLLLLDISV
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLKEIGKTFLKRISVLYIIPIFNIGIEFYRAYLQVDIDFLATVN
LVSFAALTLFAFVSIYFHLNKHKYAEHSFIIKLLILTNTLSFAPFLIFYVLPIILTGNYIFPALVSASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYTLLAIIPTLITVGALVWFDLVEIQMNPARQTVFIFVVMFSVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRSVTSLQQVFKELKNTILDVLLVSKAYTFEIAPDHKVIYLDKQVKEPDWQLYEKEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMQIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLAEFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDG
VGFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=697575 NDR85_RS15990 WP_263870718.1 3156311..3158620(-) (comP) [Bacillus halotolerans strain XE48]
TTGAAGAACTTAATAAAAAAATTCACATTAACTGTAATTGTTATGAGTGTTCTCTATGTATGCTACATAACATATATCAG
TATGAATGGTATTATAATTGGCACTAAGGTTCAAAAAAATCATAAAAATCAATTTGTAATAGAAGAAATATCAGAGTCTT
CGTATGGACAATTTGTTGGTCTCAGAACGGGAGATATCATATTAAAAATTAATGAAGAAAAACCATCTGAAAAGCATTTG
AAATGGGGATATTTGAGCCATATTAACAGTTTGGATATTTTAAGATATGGAAAAAAGATTCATCTCGAAGATTTTGATTT
AGTTACTTTAAATAGAACTTATAGTTTCTTTTTGTTCGTACTCCCCTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAGGTAAGTAAAGTAAGAAAGTCATTTGCTGGTTATATTCTTGTTTTGCTGTTATTAGACATTTCAGTA
GCTTATATAAGTGCAGGTGGACCATTTAGAGGACATAGAATTAATAGGTATATAAACTTGTTTACTTTTATATCCTCTCC
TATTCTTTATCTTCAGTTTATACAAGGATATCTTAAAGAGATAGGAAAAACTTTTTTGAAAAGAATCTCGGTTCTCTATA
TAATCCCCATATTTAACATAGGGATTGAGTTTTATCGCGCCTATCTTCAAGTTGATATTGATTTTCTGGCGACTGTTAAT
TTGGTTTCATTTGCGGCTTTAACTTTATTTGCTTTTGTATCGATATACTTCCATCTAAATAAACATAAATATGCTGAGCA
TTCGTTTATTATTAAATTATTAATTTTAACAAATACACTATCATTTGCGCCATTTTTAATATTTTATGTTCTTCCGATAA
TACTTACAGGTAACTATATTTTCCCTGCATTAGTTTCAGCGTCGTTGCTTGTACTTATTCCTTTCGGTTTAGTGTATCAG
TTTGTGGCCAATAAAATGTTTGATATAGAATTTATTTTAGGAAGGATGAGATATTATACTCTCCTTGCTATCATACCTAC
TCTAATTACAGTTGGAGCATTAGTTTGGTTTGATCTAGTGGAAATACAAATGAATCCTGCACGCCAAACTGTATTTATTT
TTGTTGTCATGTTCTCTGTCTTTTATTTCAAAGAGGTCATAGATTTTAAATTTCGATTGAAACGGTTTTCTGAAAAATTC
AACTATCAGGACAGTATTTTTAAATACACTCAGCTAATGAGAAGCGTAACTTCTCTTCAACAAGTCTTTAAAGAATTGAA
AAATACTATTTTGGATGTCCTGCTTGTAAGCAAGGCATATACCTTCGAAATTGCTCCTGATCACAAAGTGATATATCTAG
ATAAGCAAGTCAAGGAACCAGATTGGCAACTATATGAAAAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAGATTATC
GAAGTTAATCAGGGTTTTCTCATGAAAGTTGGTGAACGGGGCGGAAGTTCTTATGTCCTGCTTTGTTTGTCTAATATTAA
TACTCCCAGACTGACACGTGATGAAATATCATGGCTGAAGACACTTTCTTTTTACACGAGCGTGTCAATGGAAAATGTCA
TGCAGATTGAAGAACTCATGGAACATTTAAAGGATTTAAAACAAGAAGGGACAAACCCTATTTGGCTGAAAAAGCTGATG
TTTGCAATTGAAGAGAAACAACGGTCAGGCCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCATTAAA
ACGGCAGTGTGAGCTGTTTTTGGCTGAGTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGAT
TTGGGACTGGTGAAGGCGCTGTCCAAGCTGGTAGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGG
CAGATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGA
AACATTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGATGATGGT
GTCGGATTTGATCTGGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTT
AGATGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

89.857

100

0.899