Detailed information NTG0697564

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: NDR85_RS13110
• Genome accession: NZ_CP098738
• Coordinates: 2609305..2609922 (-)
• Length: 205 a.a.
• NCBI ID: WP_263870672.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XE48
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2604305..2614922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR85_RS13080 (NDR85_13055)	rpsT	2604603..2604869 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
NDR85_RS13085 (NDR85_13060)	holA	2604884..2605927 (-)	1044	WP_044154489.1	DNA polymerase III subunit delta	-
NDR85_RS13090 (NDR85_13065)	-	2605967..2606116 (-)	150	WP_125825438.1	hypothetical protein	-
NDR85_RS13095 (NDR85_13070)	-	2606157..2606291 (+)	135	WP_010335005.1	YqzM family protein	-
NDR85_RS13100 (NDR85_13075)	comEC	2606330..2608666 (-)	2337	WP_263871001.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NDR85_RS13105 (NDR85_13080)	-	2608670..2609239 (-)	570	WP_044154488.1	ComE operon protein 2	-
NDR85_RS13110 (NDR85_13085)	comEA	2609305..2609922 (-)	618	WP_263870672.1	helix-hairpin-helix domain-containing protein	Machinery gene
NDR85_RS13115 (NDR85_13090)	comER	2610006..2610827 (+)	822	WP_059335445.1	late competence protein ComER	-
NDR85_RS13120 (NDR85_13095)	-	2610892..2611635 (-)	744	WP_059293569.1	class I SAM-dependent methyltransferase	-
NDR85_RS13125 (NDR85_13100)	rsfS	2611632..2611988 (-)	357	WP_044154484.1	ribosome silencing factor	-
NDR85_RS13130 (NDR85_13105)	yqeK	2612006..2612566 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NDR85_RS13135 (NDR85_13110)	-	2612556..2613125 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
NDR85_RS13140 (NDR85_13115)	yhbY	2613136..2613426 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
NDR85_RS13145 (NDR85_13120)	aroE	2613426..2614262 (-)	837	WP_263870673.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22012.86 Da
• Isoelectric Point: 5.1547

>NTDB_id=697564 NDR85_RS13110 WP_263870672.1 2609305..2609922(-) (comEA) [Bacillus halotolerans strain XE48]
MNWLNQHKTIIMSAGSAAVLIAVLCLFFFSGHNKEPVKQVVSSEKENTEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSKGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=697564 NDR85_RS13110 WP_263870672.1 2609305..2609922(-) (comEA) [Bacillus halotolerans strain XE48]
TTGAATTGGTTGAACCAACATAAAACGATAATTATGTCAGCGGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGACATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATACCGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATTGATATAAAAGGCGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTGTCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCGCAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTAAGGGGAAGGAGACATTGGTCAATATCAATACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCTGAAGCGATTATTGCATATCGGGAAGAGAACGGGCGTTTCCAAACAATTGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	78.155	100	0.785
comEA	Staphylococcus aureus N315	38.288	100	0.415
comEA	Staphylococcus aureus MW2	38.182	100	0.41
comEA	Latilactobacillus sakei subsp. sakei 23K	35.78	100	0.38