Detailed information NTG0697562

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: NDR85_RS13100
• Genome accession: NZ_CP098738
• Coordinates: 2606330..2608666 (-)
• Length: 778 a.a.
• NCBI ID: WP_263871001.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XE48
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2601330..2613666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR85_RS13065 (NDR85_13040)	-	2601670..2602008 (-)	339	WP_044154492.1	YqxA family protein	-
NDR85_RS13070 (NDR85_13045)	spoIIP	2602025..2603230 (-)	1206	WP_044154491.1	spore autolysin SpoIIP	-
NDR85_RS13075 (NDR85_13050)	gpr	2603293..2604399 (-)	1107	WP_044154490.1	GPR endopeptidase	-
NDR85_RS13080 (NDR85_13055)	rpsT	2604603..2604869 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
NDR85_RS13085 (NDR85_13060)	holA	2604884..2605927 (-)	1044	WP_044154489.1	DNA polymerase III subunit delta	-
NDR85_RS13090 (NDR85_13065)	-	2605967..2606116 (-)	150	WP_125825438.1	hypothetical protein	-
NDR85_RS13095 (NDR85_13070)	-	2606157..2606291 (+)	135	WP_010335005.1	YqzM family protein	-
NDR85_RS13100 (NDR85_13075)	comEC	2606330..2608666 (-)	2337	WP_263871001.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NDR85_RS13105 (NDR85_13080)	-	2608670..2609239 (-)	570	WP_044154488.1	ComE operon protein 2	-
NDR85_RS13110 (NDR85_13085)	comEA	2609305..2609922 (-)	618	WP_263870672.1	helix-hairpin-helix domain-containing protein	Machinery gene
NDR85_RS13115 (NDR85_13090)	comER	2610006..2610827 (+)	822	WP_059335445.1	late competence protein ComER	-
NDR85_RS13120 (NDR85_13095)	-	2610892..2611635 (-)	744	WP_059293569.1	class I SAM-dependent methyltransferase	-
NDR85_RS13125 (NDR85_13100)	rsfS	2611632..2611988 (-)	357	WP_044154484.1	ribosome silencing factor	-
NDR85_RS13130 (NDR85_13105)	yqeK	2612006..2612566 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NDR85_RS13135 (NDR85_13110)	-	2612556..2613125 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
NDR85_RS13140 (NDR85_13115)	yhbY	2613136..2613426 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 778 a.a.
• Molecular weight: 86541.76 Da
• Isoelectric Point: 7.8329

>NTDB_id=697562 NDR85_RS13100 WP_263871001.1 2606330..2608666(-) (comEC) [Bacillus halotolerans strain XE48]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLFLFLLIVSIKTRHAPLIFVCLFSFVLNFALFKITDSQNTSSYQQGSY
DFKAVIHSIPKIDGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGALEKPKQATVPGTFDYQQYLYRQ
HIHWSYSVTSIGNCSEPSDVRYKLLSLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGL
HIGILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLF
NPYYLFEAGFQLSFAVSFSLILSSSIFQHIKTSLGQLTIVSVIAQIGSLPILLYHFQQFSIISIPMNMVLVPFYTFCILP
AAIIGVILLFFSASVGQFLFYWFDVMMTWTNRLITKIADIDIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFLRLTVS
TSLFCATLILLFVFPYVSSDGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTA
KGIKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSESHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLS
PETSDPASKNNSSLVLWMKTGRLSWLLTGDLEKEGEQEVINVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAG
ENNRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKNGSGTFSVYPPYDTSDMTETN

Nucleotide

• Length: 2337 bp

>NTDB_id=697562 NDR85_RS13100 WP_263871001.1 2606330..2608666(-) (comEC) [Bacillus halotolerans strain XE48]
ATGCGGAATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTTTCTCTTTCTTCTTATTGTGTCAATCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTT
TATTCTCTTTTGTACTCAATTTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGGAAGCTAT
GACTTCAAGGCGGTCATTCATAGTATTCCTAAAATTGACGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGA
AAAATGGGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCG
AATTGACTGGTGCTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTACCGGCAG
CATATTCATTGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGATGTCCGGTATAAGCTTCTCAGTTT
GAGAAAATACATCGTATCATTCACGAACACACAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTG
AAAGATCTTATTTGGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTC
CATATCGGGATTTTGACAGCAGGCCTATTTTACGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTATT
GCTTTTGTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCCTCTGTTCTCCGAGCCGCTCTGATGTCGGGCATAT
ACTTAGCGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTT
AATCCCTACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCATCTATTTT
TCAGCATATCAAAACGAGTCTGGGACAGCTGACGATTGTATCTGTTATCGCCCAGATAGGCTCACTGCCCATTCTTCTGT
ATCATTTTCAGCAGTTTTCTATCATTAGCATTCCAATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCG
GCTGCTATTATAGGAGTTATTCTATTATTTTTTTCAGCATCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGAT
GACCTGGACCAACAGACTGATCACTAAAATCGCTGATATAGATATATTCACAATCATCATCTCACGTCCTGCACCTGCTC
TTCTTCTCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCTCCGGCTGACAGTGTCC
ACAAGCCTTTTTTGTGCAACACTTATCCTGCTCTTTGTTTTCCCTTATGTTAGTTCCGACGGAGAAGTAGATATGATTGA
TATCGGTCAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGCGTTTTAATTGATACGGGAGGCACTTTGT
CTTATTCGTCAGAGCCTTGGCGCGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCA
AAGGGCATCAAGCAGCTTGATGCGCTTATACTGACGCACGCAGATCAAGATCATATCGGAGAGGCAGAGGTTTTGCTGAA
GCATCATAAAGTGAAGCGTCTCATCATTCCGAAAGGATTTGTTTCTGAATCGCATGATGAGAAGGTGCTGCGGACTGCCA
GACAGGAGGGGGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCA
CCGGAAACGTCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGCTCAGCTGGCTCCT
GACGGGTGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCAATGTGTTCCCGAATATAAAAGCGGATGTGTTAAAGGTAG
GGCATCATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGT
GAAAACAATAGGTACCATCATCCGCATCAAGAGGTTCTTCAATTGTTAAAGAGCCGATCCATCCGTGTGCTGCGCACGGA
TCAAAGCGGCACGATCCAATACACGTACAAAAACGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATA
TGACAGAGACGAATTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (210-471)

• Domain of unknown function (DUF4131) (DUF4131) (27-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (509-720)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	79.177	100	0.792