Detailed information NTG0696576

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: NDN18_RS14775
• Genome accession: NZ_CP098521
• Coordinates: 3087742..3088860 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain Cl107
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3082742..3093860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN18_RS14765 (NDN18_14760)	-	3085858..3086550 (-)	693	WP_001108513.1	YggS family pyridoxal phosphate-dependent enzyme	-
NDN18_RS14770 (NDN18_14765)	pilT	3086677..3087714 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
NDN18_RS14775 (NDN18_14770)	pilU	3087742..3088860 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
NDN18_RS14780 (NDN18_14775)	fur	3088930..3089367 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
NDN18_RS14785 (NDN18_14780)	-	3089479..3089877 (+)	399	WP_001170993.1	outer membrane protein assembly factor BamE	-
NDN18_RS14790 (NDN18_14785)	-	3089932..3090255 (-)	324	WP_000442582.1	RnfH family protein	-
NDN18_RS14795 (NDN18_14790)	-	3090255..3091322 (-)	1068	WP_004736014.1	hypothetical protein	-
NDN18_RS14800 (NDN18_14795)	-	3091475..3091930 (-)	456	WP_000782976.1	bacteriohemerythrin	-
NDN18_RS14805 (NDN18_14800)	-	3092182..3093030 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=696576 NDN18_RS14775 WP_000347039.1 3087742..3088860(+) (pilU) [Acinetobacter baumannii strain Cl107]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=696576 NDN18_RS14775 WP_000347039.1 3087742..3088860(+) (pilU) [Acinetobacter baumannii strain Cl107]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCATCGGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTACAGTTACCACCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAAGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGCTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCGCTTAAACATGCTGATTCACCGAACGATTTGCG
TTTAACCATTAAACTTGCAGATGAAGGTCCCGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGATCGTCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395