Detailed information NTG0693114

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: M8C01_RS14550
• Genome accession: NZ_CP097858
• Coordinates: 3181008..3181877 (+)
• Length: 289 a.a.
• NCBI ID: WP_041058619.1
• Uniprot ID: A0AAP9GA24
• Organism: Vibrio owensii strain GL-605
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176008..3186877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8C01_RS14530	nadC	3176427..3177314 (+)	888	WP_264403758.1	carboxylating nicotinate-nucleotide diphosphorylase	-
M8C01_RS14535	pilA	3177579..3177992 (+)	414	WP_039987783.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
M8C01_RS14540	pilB	3177993..3179678 (+)	1686	WP_264403759.1	type IV-A pilus assembly ATPase PilB	Machinery gene
M8C01_RS14545	pilC	3179712..3180935 (+)	1224	WP_264403760.1	type II secretion system F family protein	Machinery gene
M8C01_RS14550	pilD	3181008..3181877 (+)	870	WP_041058619.1	A24 family peptidase	Machinery gene
M8C01_RS14555	coaE	3181878..3182492 (+)	615	WP_264403761.1	dephospho-CoA kinase	-
M8C01_RS14560	zapD	3182520..3183260 (+)	741	WP_009707572.1	cell division protein ZapD	-
M8C01_RS14565	yacG	3183323..3183517 (+)	195	WP_009707573.1	DNA gyrase inhibitor YacG	-
M8C01_RS14570	rplS	3183917..3184270 (-)	354	WP_005438036.1	50S ribosomal protein L19	-
M8C01_RS14575	trmD	3184312..3185055 (-)	744	WP_005425529.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
M8C01_RS14580	rimM	3185083..3185631 (-)	549	WP_005438038.1	ribosome maturation factor RimM	-
M8C01_RS14585	rpsP	3185662..3185910 (-)	249	WP_005438039.1	30S ribosomal protein S16	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32648.87 Da
• Isoelectric Point: 7.8754

>NTDB_id=693114 M8C01_RS14550 WP_041058619.1 3181008..3181877(+) (pilD) [Vibrio owensii strain GL-605]
MEVFQYYPWLFVVFATIFGLIVGSFLNVVIYRLPKIMELEWRRECAESFPEYKIEPPKEKLTLSVPRSSCQQCGTQIRIR
DNIPVISWLLLRGKCHNCQSPISARYPLIELLTAFCSGFIAFHFGFSYFTVALVFFTFVLIAATFIDLDTMLLPDQLTLP
LMWAGIALALSGISPVNLQDSIIGAMAGYLCLWSVYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQSLPMIILLSSVVGV
IFGLIQLRLQKQGIEKAFPFGPYLAIAGWVSLIWGHQILNWYFTSILGV

Nucleotide

• Length: 870 bp

>NTDB_id=693114 M8C01_RS14550 WP_041058619.1 3181008..3181877(+) (pilD) [Vibrio owensii strain GL-605]
ATGGAAGTATTCCAGTACTACCCATGGCTATTCGTTGTATTTGCCACGATTTTCGGTTTGATTGTGGGTAGTTTCCTCAA
CGTTGTTATTTATCGATTACCCAAAATCATGGAATTAGAATGGCGACGCGAATGCGCGGAATCGTTCCCTGAATATAAAA
TAGAACCACCAAAAGAGAAGCTGACATTAAGCGTACCACGCTCATCTTGTCAGCAATGTGGCACTCAAATTCGTATTCGT
GACAATATCCCAGTGATTAGTTGGCTGCTTCTACGCGGTAAATGCCACAACTGCCAATCTCCTATCAGTGCACGCTACCC
TCTTATCGAACTGCTTACTGCCTTTTGTTCGGGTTTTATCGCTTTTCACTTCGGTTTTAGCTACTTCACTGTCGCGTTGG
TTTTCTTTACCTTTGTATTGATTGCCGCCACGTTTATCGATCTCGATACCATGTTGTTACCAGACCAGCTTACATTGCCA
TTAATGTGGGCAGGTATTGCGCTCGCGCTCTCTGGCATCAGCCCTGTGAACCTACAAGACTCCATCATTGGTGCAATGGC
AGGTTATCTGTGTCTTTGGAGTGTTTACTGGTTGTTTAAGCTCCTTACAGGCAAAGAAGGCATGGGCTATGGTGACTTTA
AACTTCTTGCCGCATTAGGTGCTTGGTTGGGTTGGCAATCTCTACCGATGATCATTCTGCTTTCATCAGTAGTGGGCGTC
ATCTTTGGTCTTATCCAACTGCGTTTGCAAAAACAAGGTATCGAGAAAGCCTTTCCTTTCGGCCCTTACCTTGCAATTGC
GGGATGGGTGAGCCTAATTTGGGGCCATCAAATCCTCAACTGGTACTTTACGTCGATTCTAGGAGTGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (17-124)

• Type IV leader peptidase family (Peptidase_A24) (135-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio campbellii strain DS40M4	97.924	100	0.979
pilD	Vibrio cholerae strain A1552	75.347	99.654	0.751
pilD	Acinetobacter baumannii D1279779	52.364	95.156	0.498
pilD	Acinetobacter nosocomialis M2	52.364	95.156	0.498
pilD	Neisseria gonorrhoeae MS11	45.652	95.502	0.436