Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   M9H69_RS08380 Genome accession   NZ_CP097843
Coordinates   1652690..1654657 (-) Length   655 a.a.
NCBI ID   WP_250315375.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1647690..1659657
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS08365 (M9H69_08365) cps4B 1648209..1648940 (-) 732 WP_250315372.1 capsular polysaccharide biosynthesis protein Cps4B -
  M9H69_RS08370 (M9H69_08370) - 1648942..1650387 (-) 1446 WP_250315373.1 LCP family protein -
  M9H69_RS08375 (M9H69_08375) amiA3 1650579..1652540 (-) 1962 WP_250315374.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS08380 (M9H69_08380) amiA 1652690..1654657 (-) 1968 WP_250315375.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS08385 (M9H69_08385) - 1654827..1656437 (-) 1611 WP_250315376.1 alpha-glucosidase -
  M9H69_RS08390 (M9H69_08390) - 1656590..1658074 (+) 1485 WP_250315377.1 DUF1846 domain-containing protein -
  M9H69_RS08395 (M9H69_08395) - 1658209..1659240 (-) 1032 WP_250315378.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 655 a.a.        Molecular weight: 72444.96 Da        Isoelectric Point: 5.0730

>NTDB_id=692947 M9H69_RS08380 WP_250315375.1 1652690..1654657(-) (amiA) [Streptococcus oralis strain HP01]
MRSKKWLLGAGAVLSTALLLTACGKSEKKADAPKTFSYVYAMDPSSLDYSVTSKSSTSDVIANVVDGLLENDKYGNLIPS
LAEDWSVSKDGLTYTYKLRKGVKWYTSEGEEYAEVKAQDFVTGLKHAADGKSDGLTLIQDSIKGLAAYISGESNDFSTVG
VKAVDDYTVEYTLNKPESFWNSKVTTATMLPVNEEFLNSKGGDYGAPTPSSILYNGPYFLKSLTSKSAIEYEKNPNYWDK
DNVKIDNVKLTFYDGSDQESLIRSFTQGAYTTARLFPTSSNFESTKKEYGDKIVYSPQEATSYYLTVNVNRQSYNKTAKT
DEAQKTSTKEALLNKNFRQALNFALDRHSYTAQLNGEEGADKIIRNSLVPHDYVQVGEKTFGELAQAELVSYGDQWKDVA
LTDGKDTIYSPEKAKAAFAKAKEELQGKGVTFPIHLDIPVEQTDVIAVQQTNSLKQSIESSLGTENVIVDVLQMTDNEKM
SITSQAKVPSQKDYDLNGTGWGPDYQDPATYLNILDAKKGSALKHLGITRGKDPEVMAQVGLDEYKKLLDDAAAETSDLN
KRYEKYAKAQAWVSDSSLLIPVASSGGSPTVSRTVPFTKAYSQVGIKGDPFVFKGLELQNDVVTAKEYEEAFKKWQQEKI
ETNAKYQKELEKHVK

Nucleotide


Download         Length: 1968 bp        

>NTDB_id=692947 M9H69_RS08380 WP_250315375.1 1652690..1654657(-) (amiA) [Streptococcus oralis strain HP01]
ATGAGATCGAAAAAGTGGCTCTTAGGAGCAGGTGCCGTCCTGAGCACAGCCCTTCTGTTAACTGCTTGTGGGAAAAGTGA
AAAGAAGGCTGATGCACCCAAGACATTCTCTTATGTCTATGCTATGGATCCATCGTCTTTGGACTACAGTGTGACGAGCA
AGAGTTCAACTTCTGATGTTATAGCGAACGTTGTCGATGGCCTTTTGGAAAATGATAAGTATGGAAACTTAATTCCATCG
CTTGCAGAAGACTGGTCCGTTTCTAAAGATGGCTTGACCTATACCTACAAACTTCGTAAGGGTGTAAAATGGTATACTTC
TGAGGGAGAAGAGTACGCTGAAGTCAAGGCTCAGGATTTTGTTACTGGTCTAAAACACGCAGCTGATGGGAAATCAGATG
GTCTTACTTTGATTCAAGATTCTATCAAAGGATTAGCTGCCTACATCAGTGGAGAAAGCAATGACTTTTCTACAGTAGGA
GTCAAAGCTGTTGACGATTACACGGTAGAATATACGCTCAACAAGCCAGAAAGTTTCTGGAACTCTAAAGTCACAACTGC
GACCATGCTTCCAGTAAATGAAGAGTTTTTGAATTCTAAAGGGGGCGACTACGGTGCGCCAACTCCATCAAGCATCCTTT
ATAACGGTCCTTATTTCTTGAAATCATTGACTTCAAAATCAGCCATTGAATATGAAAAGAATCCAAATTACTGGGATAAG
GACAATGTTAAGATTGACAATGTCAAATTAACTTTCTACGATGGATCTGACCAAGAATCTTTGATTCGTAGCTTTACACA
AGGTGCCTATACAACAGCTCGTCTCTTCCCAACAAGCTCAAACTTTGAGTCAACTAAAAAAGAGTATGGCGATAAGATTG
TCTACAGTCCACAAGAAGCGACAAGCTACTATCTTACTGTTAACGTAAACCGTCAATCTTACAATAAAACAGCCAAAACA
GACGAAGCTCAAAAAACTTCAACAAAAGAAGCTCTTCTCAACAAGAACTTCCGCCAGGCGCTGAACTTTGCTCTTGACCG
TCATTCTTATACTGCTCAGTTGAATGGTGAAGAAGGTGCAGACAAGATTATCCGTAACAGCCTAGTGCCTCATGACTACG
TTCAAGTGGGCGAAAAAACCTTTGGAGAGTTGGCGCAGGCAGAGCTCGTTTCATATGGAGACCAGTGGAAAGATGTAGCC
CTTACAGATGGCAAGGATACGATTTACAGCCCTGAAAAAGCCAAGGCAGCCTTTGCTAAAGCCAAGGAAGAATTGCAGGG
CAAGGGGGTTACTTTCCCAATCCATTTGGATATCCCAGTTGAACAAACAGATGTAATCGCGGTTCAGCAAACTAACTCAC
TCAAGCAGTCTATCGAATCATCACTTGGTACTGAAAATGTCATTGTCGATGTCCTTCAAATGACTGATAATGAAAAAATG
AGCATTACGTCTCAAGCCAAGGTTCCATCCCAAAAAGACTATGACTTGAACGGAACTGGTTGGGGCCCTGATTATCAAGA
CCCAGCTACCTACCTCAACATTCTTGATGCCAAGAAGGGTTCTGCCCTTAAACACTTGGGTATCACTCGTGGAAAAGATC
CAGAAGTGATGGCTCAAGTTGGACTGGACGAATACAAGAAACTCTTGGATGATGCTGCAGCTGAAACCAGCGACCTCAAC
AAACGCTATGAAAAATACGCTAAAGCTCAAGCTTGGGTGTCTGATAGCTCACTCTTAATCCCAGTTGCTTCTTCAGGTGG
TTCTCCAACTGTTAGCCGAACTGTACCATTCACAAAAGCCTACTCTCAAGTCGGAATCAAGGGAGACCCATTTGTGTTCA
AAGGATTGGAGTTGCAAAATGATGTTGTGACTGCAAAAGAATACGAAGAAGCCTTCAAGAAATGGCAACAAGAAAAAATC
GAAACAAATGCCAAATACCAAAAAGAACTTGAAAAACATGTCAAGTAA

Domains

Predicted by InterProScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

55.319

100

0.556
  amiA3 Streptococcus thermophilus LMD-9

54.021

100

0.544
  amiA3 Streptococcus thermophilus LMG 18311

53.566

100

0.539