Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   M9H69_RS08375 Genome accession   NZ_CP097843
Coordinates   1650579..1652540 (-) Length   653 a.a.
NCBI ID   WP_250315374.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1645579..1657540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS08355 (M9H69_08355) - 1646815..1647498 (-) 684 WP_250315371.1 tyrosine-protein kinase -
  M9H69_RS08360 (M9H69_08360) cpsC 1647508..1648200 (-) 693 WP_000664131.1 capsular polysaccharide biosynthesis protein CpsC -
  M9H69_RS08365 (M9H69_08365) cps4B 1648209..1648940 (-) 732 WP_250315372.1 capsular polysaccharide biosynthesis protein Cps4B -
  M9H69_RS08370 (M9H69_08370) - 1648942..1650387 (-) 1446 WP_250315373.1 LCP family protein -
  M9H69_RS08375 (M9H69_08375) amiA3 1650579..1652540 (-) 1962 WP_250315374.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS08380 (M9H69_08380) amiA 1652690..1654657 (-) 1968 WP_250315375.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS08385 (M9H69_08385) - 1654827..1656437 (-) 1611 WP_250315376.1 alpha-glucosidase -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73214.57 Da        Isoelectric Point: 4.8352

>NTDB_id=692946 M9H69_RS08375 WP_250315374.1 1650579..1652540(-) (amiA3) [Streptococcus oralis strain HP01]
MIKMKKRLIETGLVLATGILLSACGQFNTNTSTYSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLTPALA
EDWSVSADGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFENGAYSIAGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKTYNHTAKTTD
EQKKSVQTAILNKNFRQAINFGIDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDAYFNKEKAQAKFAEAKKELEAQGVTFPIHLDVPVDQTNKNAVSGMNSVKQTLETVLGSDNIVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAETGFYLKIFGLDAKEDQELIKSLGLDTYTQLLKEADAENKDVAKR
YEKYAEAQAWMIDNSLIMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEAESKKA
IEKSQKEFENHIK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=692946 M9H69_RS08375 WP_250315374.1 1650579..1652540(-) (amiA3) [Streptococcus oralis strain HP01]
ATGATCAAAATGAAAAAAAGACTAATCGAGACAGGTCTTGTCTTAGCGACAGGGATTTTGCTTTCGGCGTGTGGACAGTT
CAACACAAATACTAGCACTTATTCATCAACATTTAGTGCGAATCCAACAACTTTTAACTATCTTCTAGATTATTATGCAG
ATAATACTGCCGTTATTACCAATCTCGTAGATGGTTTGCTGGAAAATGATAGCTATGGCAACCTAACGCCAGCTCTAGCT
GAGGATTGGTCTGTTTCAGCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCAAAGTGGTATACGGCTGATGG
TGAGGAATATGCTTCAGTCAAGGCTCAGGATTTTGTCACTGGGATCAAATATGCCGCTGACAACAAGGGGCAAGCCATGG
ATCTGATCCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACCAATGACTTTTCGACTGTTGGTGTCAAA
GCCTTGGATGATTACACAGTCGAGTACACTTTGACTCGACCAGAACCGTATTGGAATTCAAAGACAACCAATAGTATCCT
TTTTCCAGTCAACGAAGAGTTCTTGAAATCAAAGGATAAAGACTTTGGTACCTTGACACCAGACAGCATCCTTTATAACG
GTCCATATCTGTTAAAAGATTTCACATCAAAATCTTCGATCGAATATGTGAAGAATCCACACTATTATGACCATGATAAA
GTAACCATTGAAAAAGTTAAGTTAGCCTACTTTGATGGGTCAGATCAGGAGATGACCATTCGAAACTTTGAAAATGGCGC
CTACTCGATTGCGGGAGTCTATCCAAATAGTTCGAACTATGCCAAGACAAAAGAAAAATACCAAGACAATATCGTTTATA
GCTTGCAAGACAAGACATCTTGGTACTTTAACTTTAACGTCAACCGCAAAACCTATAATCATACCGCTAAAACAACGGAC
GAACAAAAGAAATCAGTTCAAACAGCTATCTTAAATAAAAATTTCCGTCAGGCTATCAACTTTGGTATTGATCGAACAGC
CTACTCTGCTCAATCTAACGGTGAAGAGGCAGCGAGCAAAACCCTTCGTAATACTTTGGTTCCACCAACATTTGTTCAGG
TGGGAGATAAGACCTTTGGAGAAGTGACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGTATCAATTTGGCA
GACGCTCAAGATGCTTACTTTAACAAGGAAAAGGCCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTGGAAGCCCAAGG
CGTGACTTTCCCAATCCATTTGGATGTCCCTGTTGATCAGACAAATAAAAATGCGGTTTCTGGTATGAACTCGGTTAAAC
AAACCCTTGAAACAGTACTAGGTTCTGACAATATCGTCATTGATGTTCAACAGCTTTCTACAGATGACTTTGGAAATGTT
GCCTTCCTAGCGCCAAATCCAGCAGCTCGTGACTACGACTTAAACTTTGATGGTTGGGTTGGTGATTACCAGGATCCATC
AACTTATCTAGATCCCTTCAATGCTGAAACCGGCTTCTATCTCAAGATTTTTGGCCTTGATGCCAAGGAAGACCAAGAGC
TCATCAAGAGTCTGGGGCTCGATACCTATACACAACTCCTGAAAGAAGCAGATGCCGAGAATAAAGATGTCGCTAAGCGT
TATGAAAAATACGCTGAAGCCCAAGCTTGGATGATTGACAATTCTCTAATCATGTCTGCTATGTCAAATGGTGGGACAGC
CTCTGTAACTAAAGTAACTCCGTTTACACGTGCCTACTCCCTAGTGGGTATCAAGGGTGACGGAAATAATTATAAGTACA
TGAGATTGCAAAAGGACCCTGTTACCAAGAAACAATTCGACGAAGCCAAGGCTAAGTGGGAAGCAGAAAGTAAAAAGGCT
ATTGAAAAGAGCCAAAAAGAGTTTGAAAATCATATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

50.837

100

0.511
  amiA3 Streptococcus thermophilus LMG 18311

50.685

100

0.51
  amiA Streptococcus salivarius strain HSISS4

50.152

100

0.504