Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   M9H69_RS02550 Genome accession   NZ_CP097843
Coordinates   462106..462765 (-) Length   219 a.a.
NCBI ID   WP_057489308.1    Uniprot ID   A0A1X1FYQ2
Organism   Streptococcus oralis strain HP01     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 457106..467765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS02520 (M9H69_02520) - 457233..457799 (+) 567 WP_250315811.1 aminodeoxychorismate/anthranilate synthase component II -
  M9H69_RS02525 (M9H69_02525) trpD 457810..458814 (+) 1005 WP_250315812.1 anthranilate phosphoribosyltransferase -
  M9H69_RS02530 (M9H69_02530) trpC 458811..459578 (+) 768 WP_000076563.1 indole-3-glycerol phosphate synthase TrpC -
  M9H69_RS02535 (M9H69_02535) - 459565..460164 (+) 600 WP_000169925.1 phosphoribosylanthranilate isomerase -
  M9H69_RS02540 (M9H69_02540) trpB 460142..461365 (+) 1224 WP_000331254.1 tryptophan synthase subunit beta -
  M9H69_RS02545 (M9H69_02545) trpA 461358..462134 (+) 777 WP_001127003.1 tryptophan synthase subunit alpha -
  M9H69_RS02550 (M9H69_02550) cclA/cilC 462106..462765 (-) 660 WP_057489308.1 A24 family peptidase Machinery gene
  M9H69_RS02555 (M9H69_02555) - 462835..463290 (+) 456 WP_057489309.1 GNAT family N-acetyltransferase -
  M9H69_RS02560 (M9H69_02560) - 463370..464629 (+) 1260 WP_000750496.1 S41 family peptidase -
  M9H69_RS02565 (M9H69_02565) - 465149..466294 (-) 1146 WP_250315813.1 low temperature requirement protein A -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24912.10 Da        Isoelectric Point: 8.1626

>NTDB_id=692918 M9H69_RS02550 WP_057489308.1 462106..462765(-) (cclA/cilC) [Streptococcus oralis strain HP01]
MIDLYFFLVGSILASFLGLVIDRFPEQSIIRPASHCDSCQTRLRPLDLIPILSQLFNRFRCRYCKAHYPVWYALFELGLG
ALFLAWSWGFLSLGQVILITAGLTLGIYDFRHQEYPLLVWMTFHLILMACSGWNLIMFFFLALGIMAHFIDIRMGAGDFL
FLASCALVFSPTELLILIQFASATGILAFLLQKKKERLPFVPFLLLAACVIIFGKLLLV

Nucleotide


Download         Length: 660 bp        

>NTDB_id=692918 M9H69_RS02550 WP_057489308.1 462106..462765(-) (cclA/cilC) [Streptococcus oralis strain HP01]
ATGATTGATCTTTATTTTTTTCTTGTAGGGAGCATTCTCGCTTCCTTTCTGGGTTTGGTCATTGACCGTTTTCCTGAGCA
ATCCATTATCCGACCGGCTAGTCACTGCGATTCCTGTCAGACTCGCTTGCGTCCGTTAGATTTGATTCCTATCCTCTCTC
AGCTCTTCAATCGCTTTCGCTGTCGCTATTGTAAGGCTCACTATCCTGTCTGGTATGCCCTTTTTGAATTGGGCTTGGGT
GCCCTCTTTCTGGCTTGGTCATGGGGCTTCCTTTCCTTGGGCCAAGTCATTCTAATAACTGCTGGCTTGACCTTGGGAAT
CTATGACTTTCGCCATCAGGAGTATCCCTTACTGGTCTGGATGACTTTCCACCTAATCCTCATGGCCTGCTCTGGTTGGA
ATCTGATTATGTTCTTTTTCCTTGCCCTTGGAATCATGGCCCATTTTATCGATATCCGCATGGGAGCAGGGGATTTTCTA
TTTCTGGCTTCTTGTGCTCTCGTCTTTAGTCCGACCGAATTACTCATCTTGATTCAGTTCGCTTCTGCGACGGGCATTCT
GGCCTTTCTACTGCAAAAGAAAAAGGAAAGACTTCCTTTCGTGCCTTTCCTCTTACTTGCTGCTTGTGTGATTATTTTTG
GTAAGCTACTGCTTGTTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1FYQ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

93.151

100

0.932
  cclA/cilC Streptococcus pneumoniae Rx1

90.411

100

0.904
  cclA/cilC Streptococcus pneumoniae D39

90.411

100

0.904
  cclA/cilC Streptococcus pneumoniae R6

90.411

100

0.904
  cclA/cilC Streptococcus mitis NCTC 12261

89.498

100

0.895
  cclA/cilC Streptococcus pneumoniae TIGR4

88.584

100

0.886