Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | M8286_RS00765 | Genome accession | NZ_CP097577 |
| Coordinates | 122929..123882 (+) | Length | 317 a.a. |
| NCBI ID | WP_275601173.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain 3112 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 117929..128882
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8286_RS00725 (M8286_00720) | - | 118091..119041 (-) | 951 | WP_275601166.1 | S66 peptidase family protein | - |
| M8286_RS00730 (M8286_00725) | comYA | 119127..120077 (+) | 951 | WP_275601167.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M8286_RS00735 (M8286_00730) | comYB | 119989..121026 (+) | 1038 | WP_358639410.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M8286_RS00740 (M8286_00735) | comYC | 121028..121309 (+) | 282 | WP_275601168.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M8286_RS00745 (M8286_00740) | comGD | 121290..121697 (+) | 408 | WP_275601169.1 | competence type IV pilus minor pilin ComGD | - |
| M8286_RS00750 (M8286_00745) | comYE | 121669..121962 (+) | 294 | WP_275601170.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| M8286_RS00755 (M8286_00750) | comGF/cglF | 121949..122383 (+) | 435 | WP_275601171.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M8286_RS00760 (M8286_00755) | comGG | 122361..122879 (+) | 519 | WP_275601172.1 | competence type IV pilus minor pilin ComGG | - |
| M8286_RS00765 (M8286_00760) | comYH | 122929..123882 (+) | 954 | WP_275601173.1 | class I SAM-dependent methyltransferase | Machinery gene |
| M8286_RS00770 (M8286_00765) | - | 123932..125119 (+) | 1188 | WP_167787180.1 | acetate kinase | - |
| M8286_RS00775 (M8286_00770) | - | 125434..125985 (+) | 552 | WP_275601174.1 | folate family ECF transporter S component | - |
| M8286_RS00780 (M8286_00775) | - | 126041..127303 (+) | 1263 | WP_358637879.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| M8286_RS00785 (M8286_00780) | pepA | 127498..128559 (-) | 1062 | WP_275601176.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35752.86 Da Isoelectric Point: 4.4571
>NTDB_id=690317 M8286_RS00765 WP_275601173.1 122929..123882(+) (comYH) [Streptococcus suis strain 3112]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLAPFVYPLQNLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLAPFVYPLQNLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=690317 M8286_RS00765 WP_275601173.1 122929..123882(+) (comYH) [Streptococcus suis strain 3112]
ATGAATTTTGAAAAGATTGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTTACACCAGATTCCATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATAGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTTGAAAAAGATGGATTTGCGATTTTACTGGCTCCAAATGATTTGTTGACTAGTCCGCAA
AGCGATTTACTGAAAGGCTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGACCGTTGGCGCCGTTTGTTTATCCCTTACAAA
ATCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATTGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTTACACCAGATTCCATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATAGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTTGAAAAAGATGGATTTGCGATTTTACTGGCTCCAAATGATTTGTTGACTAGTCCGCAA
AGCGATTTACTGAAAGGCTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGACCGTTGGCGCCGTTTGTTTATCCCTTACAAA
ATCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |