Detailed information NTG0068829

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CFK21_RS00330
• Genome accession: NZ_AP018052
• Coordinates: 61627..62697 (+)
• Length: 356 a.a.
• NCBI ID: WP_201346108.1
• Uniprot ID: -
• Organism: Thiohalobacter thiocyanaticus strain FOKN1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 56627..67697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFK21_RS00315 (FOKN1_0065)	-	56878..58143 (+)	1266	WP_096363613.1	malic enzyme-like NAD(P)-binding protein	-
CFK21_RS00320 (FOKN1_0066)	-	58299..58919 (-)	621	WP_096363615.1	hypothetical protein	-
CFK21_RS00325 (FOKN1_0067)	-	58960..61275 (-)	2316	WP_231971535.1	penicillin-binding protein 1A	-
CFK21_RS00330 (FOKN1_0068)	pilM	61627..62697 (+)	1071	WP_201346108.1	pilus assembly protein PilM	Machinery gene
CFK21_RS00335 (FOKN1_0069)	-	62715..63293 (+)	579	WP_096363619.1	PilN domain-containing protein	-
CFK21_RS00340 (FOKN1_0070)	-	63296..63907 (+)	612	WP_096367421.1	type 4a pilus biogenesis protein PilO	-
CFK21_RS00345 (FOKN1_0071)	-	63904..64446 (+)	543	WP_231971536.1	pilus assembly protein PilP	-
CFK21_RS00350 (FOKN1_0072)	pilQ	64535..66637 (+)	2103	WP_096367422.1	type IV pilus secretin PilQ	-
CFK21_RS00355 (FOKN1_0073)	aroK	66678..67235 (+)	558	WP_096363623.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 38636.81 Da
• Isoelectric Point: 4.4280

>NTDB_id=68829 CFK21_RS00330 WP_201346108.1 61627..62697(+) (pilM) [Thiohalobacter thiocyanaticus strain FOKN1]
MAQIFKSRKPPLVGLDISSTAVKLLELSRSGDRYRVESYAVEPLPPNSVVEKSVTDAEAVGEAVRRAVKRSGTRARHAAV
AVAGSSVITKIIPMPASLSDADMEAQIELEADQYIPYPLEEVYKDFEILGPSANNPDTVDVLLAASRSENVDMRRAAVEA
GGLDTRVVDIEAYALENAFSLLSSQLEDEGIEKTVAVVDIGATMTTLNVLHDLKIIYTRDQVFGGKQLTEEIMRRYGLSY
EEAGMAKRQGGLPDNYVPEVLEPFKEAMAQQVNRSLQFFFSSSQYNSIDQIVLAGGSASIPGVDSLIQDQLGIDTLIANP
FANMSLASRIKTQSLSNDAPALMIACGLALRSFDER

Nucleotide

• Length: 1071 bp

>NTDB_id=68829 CFK21_RS00330 WP_201346108.1 61627..62697(+) (pilM) [Thiohalobacter thiocyanaticus strain FOKN1]
ATTGCGCAGATCTTCAAGTCCAGGAAGCCACCTCTGGTCGGACTCGACATCAGCTCCACCGCAGTCAAGCTGCTGGAACT
GAGTCGCAGCGGCGACCGCTACCGGGTGGAAAGCTACGCGGTAGAGCCCCTGCCGCCCAACTCGGTGGTGGAGAAAAGCG
TCACCGATGCGGAGGCCGTCGGCGAGGCGGTACGCCGGGCGGTCAAACGCTCCGGCACCCGTGCCCGCCATGCCGCGGTG
GCCGTGGCCGGCTCCTCGGTCATCACCAAGATCATCCCCATGCCGGCCTCGCTGTCCGATGCCGACATGGAGGCACAGAT
CGAACTGGAGGCCGACCAGTACATCCCCTACCCACTGGAGGAGGTGTACAAGGACTTCGAGATCCTGGGCCCCTCCGCCA
ACAACCCCGATACCGTGGATGTGCTGCTGGCCGCCTCGCGCAGCGAGAATGTCGACATGCGCCGGGCCGCGGTCGAGGCC
GGCGGCCTGGACACCCGGGTGGTGGACATCGAGGCCTATGCCCTGGAGAACGCCTTCTCCCTGCTCAGCAGCCAGCTTGA
GGACGAGGGCATCGAGAAGACGGTCGCCGTGGTCGACATCGGCGCGACCATGACCACGCTCAACGTCCTGCACGACCTCA
AGATCATCTATACCCGCGACCAGGTCTTCGGCGGCAAGCAACTCACCGAGGAGATCATGCGCCGTTACGGGCTTTCCTAT
GAGGAAGCGGGCATGGCCAAGCGCCAGGGCGGCCTGCCGGACAACTATGTGCCGGAGGTGCTGGAGCCGTTCAAGGAGGC
GATGGCGCAGCAGGTCAACCGGTCATTGCAGTTCTTCTTCTCCTCCAGCCAGTACAACAGCATCGACCAGATCGTGCTGG
CCGGCGGCAGCGCCTCGATCCCCGGGGTGGACAGCCTGATCCAGGACCAGCTGGGGATCGACACTCTCATCGCCAATCCC
TTCGCCAACATGTCGCTGGCATCCAGGATCAAGACCCAGTCGCTCAGCAATGACGCACCGGCACTTATGATCGCCTGCGG
CCTGGCGCTGCGCAGCTTCGACGAGCGCTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.107	99.438	0.528
comM	Acinetobacter nosocomialis M2	52.825	99.438	0.525
comM	Acinetobacter baylyi ADP1	52.676	99.719	0.525
pilM	Legionella pneumophila strain ERS1305867	42.938	99.438	0.427