Detailed information NTG0685800

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ORI33_RS21365
• Genome accession: NZ_CP110978
• Coordinates: 4467122..4468147 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain XYEH3934
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4462122..4473147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORI33_RS21340 (ORI33_21335)	metJ	4462559..4462876 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ORI33_RS21345 (ORI33_21340)	yiiX	4463060..4463668 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ORI33_RS21350 (ORI33_21345)	-	4463675..4464298 (+)	624	WP_000720774.1	TIGR02117 family protein	-
ORI33_RS21355 (ORI33_21350)	rpmE	4464353..4464565 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ORI33_RS21360 (ORI33_21355)	priA	4464768..4466966 (+)	2199	WP_096310085.1	primosomal protein N'	Machinery gene
ORI33_RS21365 (ORI33_21360)	cytR	4467122..4468147 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ORI33_RS21370 (ORI33_21365)	ftsN	4468239..4469198 (+)	960	WP_000068828.1	cell division protein FtsN	-
ORI33_RS21375 (ORI33_21370)	hslV	4469291..4469821 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ORI33_RS21380 (ORI33_21375)	hslU	4469831..4471162 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ORI33_RS21385 (ORI33_21380)	menA	4471229..4472155 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ORI33_RS21390 (ORI33_21385)	rraA	4472248..4472733 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ORI33_RS21395 (ORI33_21390)	zapB	4472818..4473063 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=685800 ORI33_RS21365 WP_000644904.1 4467122..4468147(+) (cytR) [Escherichia coli strain XYEH3934]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=685800 ORI33_RS21365 WP_000644904.1 4467122..4468147(+) (cytR) [Escherichia coli strain XYEH3934]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628