Detailed information NTG0685035

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: M2J77_RS02105
• Genome accession: NZ_CP096909
• Coordinates: 461315..462463 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain NY8688
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 456315..467463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2J77_RS02080 (M2J77_02080)	-	457466..457762 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
M2J77_RS02085 (M2J77_02085)	-	457759..458352 (-)	594	WP_003084544.1	YggT family protein	-
M2J77_RS02090 (M2J77_02090)	proC	458363..459184 (-)	822	WP_039843190.1	pyrroline-5-carboxylate reductase	-
M2J77_RS02095 (M2J77_02095)	-	459196..459888 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
M2J77_RS02100 (M2J77_02100)	pilT	460103..461137 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
M2J77_RS02105 (M2J77_02105)	pilU	461315..462463 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
M2J77_RS02110 (M2J77_02110)	czcD	462471..463370 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
M2J77_RS02115 (M2J77_02115)	-	463524..463928 (+)	405	WP_003084560.1	NINE protein	-
M2J77_RS02120 (M2J77_02120)	-	464171..465544 (+)	1374	WP_003100955.1	pyridoxal-phosphate dependent enzyme	-
M2J77_RS02125 (M2J77_02125)	-	465541..466725 (+)	1185	WP_003100953.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=685035 M2J77_RS02105 WP_003100959.1 461315..462463(+) (pilU) [Pseudomonas aeruginosa strain NY8688]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=685035 M2J77_RS02105 WP_003100959.1 461315..462463(+) (pilU) [Pseudomonas aeruginosa strain NY8688]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382