Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   SNAG_RS08460 Genome accession   NZ_AP017652
Coordinates   1669576..1670199 (-) Length   207 a.a.
NCBI ID   WP_096408900.1    Uniprot ID   A0A7T4LZX0
Organism   Streptococcus sp. NPS 308     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1664576..1675199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNAG_RS08435 (SNAG_1652) recA 1664962..1666110 (-) 1149 WP_096408404.1 recombinase RecA Machinery gene
  SNAG_RS08440 (SNAG_1653) cinA 1666165..1667421 (-) 1257 WP_096408407.1 competence/damage-inducible protein A Machinery gene
  SNAG_RS08445 (SNAG_1654) - 1667493..1668533 (-) 1041 WP_096408897.1 LCP family protein -
  SNAG_RS08450 (SNAG_1655) - 1668538..1669059 (-) 522 WP_096408409.1 GNAT family N-acetyltransferase -
  SNAG_RS08455 (SNAG_1656) tsaE 1669049..1669492 (-) 444 WP_096408412.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SNAG_RS08460 (SNAG_1657) comM 1669576..1670199 (-) 624 WP_096408900.1 hypothetical protein Regulator
  SNAG_RS08465 (SNAG_1658) ndk 1670334..1670753 (-) 420 WP_096408414.1 nucleoside-diphosphate kinase -
  SNAG_RS08470 (SNAG_1659) rpoC 1670864..1674529 (-) 3666 WP_172842404.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23718.67 Da        Isoelectric Point: 9.2521

>NTDB_id=68372 SNAG_RS08460 WP_096408900.1 1669576..1670199(-) (comM) [Streptococcus sp. NPS 308]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGFSVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSILLYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=68372 SNAG_RS08460 WP_096408900.1 1669576..1670199(-) (comM) [Streptococcus sp. NPS 308]
ATGGTAAAATCAATTCGCCTATTGTTACTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGTCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTGATAGTAGGATTTTCTGTTCTGTGTGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGTCTGGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATTCTCCTTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCAAAATGTATTCAAAGGGAAAT
CTCCTTTTATGGACACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4LZX0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.456

99.517

0.512
  comM Streptococcus pneumoniae R6

51.456

99.517

0.512
  comM Streptococcus pneumoniae TIGR4

51.456

99.517

0.512
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

40.609

95.169

0.386

Multiple sequence alignment