Detailed information NTG0682992

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIM89_RS21330
• Genome accession: NZ_CP110079
• Coordinates: 4789284..4790570 (+)
• Length: 428 a.a.
• NCBI ID: WP_023419466.1
• Uniprot ID: A0A7Y6CBQ7
• Organism: Streptomyces sp. BI87
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4784284..4795570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIM89_RS21300 (OIM89_21300)	-	4785237..4785431 (+)	195	WP_003948050.1	hypothetical protein	-
OIM89_RS21315 (OIM89_21315)	tig	4786073..4787470 (+)	1398	WP_018468119.1	trigger factor	-
OIM89_RS21320 (OIM89_21320)	clpP	4787769..4788386 (+)	618	WP_008411883.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIM89_RS21325 (OIM89_21325)	clpP	4788454..4789125 (+)	672	WP_023419465.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIM89_RS21330 (OIM89_21330)	clpX	4789284..4790570 (+)	1287	WP_023419466.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIM89_RS21335 (OIM89_21335)	-	4790668..4791648 (-)	981	WP_030698005.1	hypothetical protein	-
OIM89_RS21340 (OIM89_21340)	-	4791786..4794407 (+)	2622	WP_175458662.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46925.77 Da
• Isoelectric Point: 4.7788

>NTDB_id=682992 OIM89_RS21330 WP_023419466.1 4789284..4790570(+) (clpX) [Streptomyces sp. BI87]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWDELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGQNGAPGGREDAIELGKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEARAGAKGIGFGATIRSKREIEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
AEVVQSNVNPTLIPRDARGRGNGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=682992 OIM89_RS21330 WP_023419466.1 4789284..4790570(+) (clpX) [Streptomyces sp. BI87]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CGGAAGTGCGCTGGGACGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTGGGCCAGGAGCCC
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTGCAGGCGGGGCAGAACGGCGCACCCGGCGGGCG
TGAGGACGCCATCGAGCTGGGCAAGTCCAACATCCTGCTGCTGGGCCCGACCGGCTCCGGCAAGACCCTGCTCGCGCAGA
CGCTGGCCCGGATGCTCAACGTGCCGTTCGCCATCGCGGACGCCACGGCGCTGACCGAGGCCGGCTACGTCGGCGAGGAT
GTCGAGAACATCCTCCTCAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCGCCGCAGGGCGGGCGGAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCGGGGCTGGAGAAGATCATCGAGGCCCGGGCCGGCGC
CAAGGGCATCGGGTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCGGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGAGGTCGTCCAGTCCAACGTCAACCCGACCCTGATCCCCCGGGACGCCCGGGGCCGGGGCAACGGCGAGCAGAAGTC
GGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A7Y6CBQ7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521