Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M1F47_RS07945 | Genome accession | NZ_CP096535 |
| Coordinates | 1641482..1641781 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain RIVM_M047916 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1636482..1646781
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F47_RS07920 (M1F47_07910) | gcvPA | 1637694..1639040 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| M1F47_RS07925 (M1F47_07915) | gcvT | 1639060..1640151 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| M1F47_RS07930 (M1F47_07920) | - | 1640310..1640834 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| M1F47_RS07935 (M1F47_07925) | - | 1640824..1640970 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| M1F47_RS07940 (M1F47_07930) | comGF | 1641067..1641564 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M1F47_RS07945 (M1F47_07935) | comGE | 1641482..1641781 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M1F47_RS07950 (M1F47_07940) | comGD | 1641768..1642214 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M1F47_RS07955 (M1F47_07945) | comGC | 1642192..1642503 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M1F47_RS07960 (M1F47_07950) | comGB | 1642517..1643587 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M1F47_RS07965 (M1F47_07955) | comGA | 1643559..1644533 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M1F47_RS07970 (M1F47_07960) | - | 1644585..1645208 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| M1F47_RS07975 (M1F47_07965) | - | 1645205..1645534 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M1F47_RS07980 (M1F47_07970) | - | 1645534..1646520 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| M1F47_RS07985 (M1F47_07975) | - | 1646517..1646720 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=681649 M1F47_RS07945 WP_000844413.1 1641482..1641781(-) (comGE) [Staphylococcus aureus strain RIVM_M047916]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=681649 M1F47_RS07945 WP_000844413.1 1641482..1641781(-) (comGE) [Staphylococcus aureus strain RIVM_M047916]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |