Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MZO21_RS03680 Genome accession   NZ_CP096120
Coordinates   716044..716427 (+) Length   127 a.a.
NCBI ID   WP_154772849.1    Uniprot ID   -
Organism   Acinetobacter portensis strain JNE5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 711044..721427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZO21_RS03670 (MZO21_03665) - 713971..715089 (-) 1119 WP_248103139.1 efflux RND transporter periplasmic adaptor subunit -
  MZO21_RS03675 (MZO21_03670) - 715128..715697 (-) 570 WP_154772863.1 hypothetical protein -
  MZO21_RS03680 (MZO21_03675) pilG 716044..716427 (+) 384 WP_154772849.1 twitching motility response regulator PilG Regulator
  MZO21_RS03685 (MZO21_03680) - 716455..716823 (+) 369 WP_154772848.1 response regulator -
  MZO21_RS03690 (MZO21_03685) - 716827..717357 (+) 531 WP_154772847.1 chemotaxis protein CheW -
  MZO21_RS03695 (MZO21_03690) - 717414..719483 (+) 2070 WP_154772846.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14237.19 Da        Isoelectric Point: 4.8996

>NTDB_id=679565 MZO21_RS03680 WP_154772849.1 716044..716427(+) (pilG) [Acinetobacter portensis strain JNE5]
MDDKHQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NTPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=679565 MZO21_RS03680 WP_154772849.1 716044..716427(+) (pilG) [Acinetobacter portensis strain JNE5]
ATGGACGATAAACACCAAAATCTTAAAGTTATGGTGATTGATGATTCAAAAACTATTCGCCGAACTGCAGAAACATTATT
GCAACGCGAAGGTTATGAAGTTGTCACTGCGGTAGATGGGTTTGAAGCATTGTCCAAAATTGCTGATGCAAATCCGGATA
TTGTATTTGTTGATATTATGATGCCTCGTTTAGATGGCTATCAAACATGTGCACTCATCAAAAACTCTCAAAACTATCAA
AATACTCCTGTCATTATGTTGTCAAGTAAAGATGGCTTATTTGATCAGGCTAAAGGTCGTGTTGTGGGTTCAGATGAATA
TTTGACTAAACCATTTAGCAAGGATGAATTGCTAAACGCGATCCGTAATCACGTTTCTGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

93.701

100

0.937
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37
  chiS Vibrio cholerae strain A1552

36.508

99.213

0.362