Detailed information NTG0678747

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG747_RS14545
• Genome accession: NZ_CP109559
• Coordinates: 3212474..3213760 (-)
• Length: 428 a.a.
• NCBI ID: WP_390927316.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01384
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3207474..3218760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG747_RS14535 (OG747_14580)	-	3208626..3211250 (-)	2625	WP_405879745.1	valine--tRNA ligase	-
OG747_RS14540 (OG747_14585)	-	3211386..3212384 (+)	999	WP_405879746.1	hypothetical protein	-
OG747_RS14545 (OG747_14590)	clpX	3212474..3213760 (-)	1287	WP_390927316.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG747_RS14550 (OG747_14595)	clpP	3213932..3214612 (-)	681	WP_362087703.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG747_RS14555 (OG747_14600)	clpP	3214750..3215355 (-)	606	WP_149513863.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG747_RS14560 (OG747_14605)	tig	3215796..3217193 (-)	1398	WP_405879747.1	trigger factor	-
OG747_RS14575 (OG747_14620)	-	3217938..3218132 (-)	195	WP_329368370.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46794.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=678747 OG747_RS14545 WP_390927316.1 3212474..3213760(-) (clpX) [Streptomyces sp. NBC_01384]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=678747 OG747_RS14545 WP_390927316.1 3212474..3213760(-) (clpX) [Streptomyces sp. NBC_01384]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGGCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACACTGCTCGCCCAGA
CCCTCGCGCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTTCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTCGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCGGTCCACAACCTCGACCGC
CCTGCGCTCCTGCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCCGACGTGGTCCTGTCGAACGTCAACCCGACGCTGATCCCGCGCGACGCGCGCGGACGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521