Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   MX663_RS13460 Genome accession   NZ_CP095736
Coordinates   2566680..2566976 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain N4     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2561680..2571976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS13415 (MX663_13415) tasA 2562087..2562872 (-) 786 WP_161476870.1 biofilm matrix protein TasA -
  MX663_RS13420 (MX663_13420) sipW 2562936..2563508 (-) 573 WP_003230181.1 signal peptidase I -
  MX663_RS13425 (MX663_13425) tapA 2563492..2564253 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  MX663_RS13430 (MX663_13430) yqzG 2564525..2564851 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  MX663_RS13435 (MX663_13435) spoIIT 2564893..2565072 (-) 180 WP_029726723.1 YqzE family protein -
  MX663_RS13440 (MX663_13440) comGG 2565144..2565518 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  MX663_RS13445 (MX663_13445) comGF 2565519..2565902 (-) 384 WP_080529536.1 ComG operon protein ComGF Machinery gene
  MX663_RS13450 (MX663_13450) comGE 2565928..2566275 (-) 348 WP_080529537.1 ComG operon protein 5 Machinery gene
  MX663_RS13455 (MX663_13455) comGD 2566259..2566690 (-) 432 WP_080529538.1 comG operon protein ComGD Machinery gene
  MX663_RS13460 (MX663_13460) comGC 2566680..2566976 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  MX663_RS13465 (MX663_13465) comGB 2566990..2568027 (-) 1038 WP_029317912.1 comG operon protein ComGB Machinery gene
  MX663_RS13470 (MX663_13470) comGA 2568014..2569084 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  MX663_RS13475 (MX663_13475) corA 2569494..2570447 (-) 954 WP_004399136.1 magnesium transporter CorA -
  MX663_RS13480 (MX663_13480) yqhB 2570590..2571918 (+) 1329 WP_041850018.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=677870 MX663_RS13460 WP_003230162.1 2566680..2566976(-) (comGC) [Bacillus subtilis strain N4]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=677870 MX663_RS13460 WP_003230162.1 2566680..2566976(-) (comGC) [Bacillus subtilis strain N4]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378