Detailed information NTG0677594

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG207_RS28285
• Genome accession: NZ_CP109487
• Coordinates: 6259165..6260451 (+)
• Length: 428 a.a.
• NCBI ID: WP_030008569.1
• Uniprot ID: A0ABQ3SUV3
• Organism: Streptomyces sp. NBC_01439
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6254165..6265451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG207_RS28255 (OG207_28275)	-	6254759..6255304 (-)	546	WP_329102066.1	GNAT family N-acetyltransferase	-
OG207_RS28270 (OG207_28290)	tig	6256012..6257400 (+)	1389	WP_329102068.1	trigger factor	-
OG207_RS28275 (OG207_28295)	clpP	6257682..6258299 (+)	618	WP_329102070.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG207_RS28280 (OG207_28300)	clpP	6258346..6259011 (+)	666	WP_150257432.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG207_RS28285 (OG207_28305)	clpX	6259165..6260451 (+)	1287	WP_030008569.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG207_RS28290 (OG207_28310)	-	6260553..6261548 (-)	996	WP_329102072.1	hypothetical protein	-
OG207_RS28295 (OG207_28315)	-	6261676..6264297 (+)	2622	WP_329102074.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46962.87 Da
• Isoelectric Point: 4.7778

>NTDB_id=677594 OG207_RS28285 WP_030008569.1 6259165..6260451(+) (clpX) [Streptomyces sp. NBC_01439]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SEVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=677594 OG207_RS28285 WP_030008569.1 6259165..6260451(+) (clpX) [Streptomyces sp. NBC_01439]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTTTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATTGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTGCTCGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGTGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCCGAGGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCCCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519