Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OIU91_RS18735 Genome accession   NZ_CP109455
Coordinates   4164620..4166353 (-) Length   577 a.a.
NCBI ID   WP_329147899.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01456     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4159620..4171353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIU91_RS18720 (OIU91_18720) - 4160630..4161475 (-) 846 WP_329147895.1 response regulator transcription factor -
  OIU91_RS18725 (OIU91_18725) - 4161722..4162585 (+) 864 WP_329147897.1 alpha/beta fold hydrolase -
  OIU91_RS18730 (OIU91_18730) rcrQ 4162611..4164512 (-) 1902 WP_329155159.1 ABC transporter ATP-binding protein Regulator
  OIU91_RS18735 (OIU91_18735) rcrP 4164620..4166353 (-) 1734 WP_329147899.1 ABC transporter ATP-binding protein Regulator
  OIU91_RS18740 (OIU91_18740) - 4166577..4166840 (+) 264 WP_329147900.1 MoaD/ThiS family protein -
  OIU91_RS18745 (OIU91_18745) - 4166851..4168203 (+) 1353 WP_329147901.1 hypothetical protein -
  OIU91_RS18750 (OIU91_18750) - 4168410..4169111 (+) 702 WP_329147903.1 DUF2993 domain-containing protein -
  OIU91_RS18755 (OIU91_18755) - 4169672..4170517 (+) 846 WP_329147904.1 sulfurtransferase -
  OIU91_RS18760 (OIU91_18760) - 4170558..4170845 (+) 288 WP_189101324.1 DUF1416 domain-containing protein -
  OIU91_RS18765 (OIU91_18765) - 4171026..4171313 (+) 288 WP_249638077.1 DUF3099 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62960.37 Da        Isoelectric Point: 7.0491

>NTDB_id=676739 OIU91_RS18735 WP_329147899.1 4164620..4166353(-) (rcrP) [Streptomyces sp. NBC_01456]
MLVRLVRGHLRPHRRAISLIVLLQLIQTLATLFLPTLNADIIDNGVVKGDTGYIFGTGGFMIAVTLLQIVCAIGAVYFGA
RTAMALGRDLRAAVFDRVQSFSSREVGAFGAPSLITRTTNDVQQVQMLVLMTFTMMVTAPIMCIGGVLMALNQDVPLSGL
LLVIVPVLGVLISLIVRRLRPLFRGVQQRIDTVNRVLREQITGIRVIRAFVRDGYERERFAGANTDLFEVSLRSGRLMSM
MFPLVMLIVNLSSVAVVWFGGLRIDANDMQIGALTAFLSYLMYILMSIMMATFMVMMLPRAEVCAERIQEVLSTDSSVTP
PENPVTTLRRHGELELRHVEFRFPGAEQPVLKDISLIARPGETTAVIGSTGSGKSTLLGLVPRLFDATGGAVLVDGEDVR
TLDHETLARTIGLVPQKPYLFSGTVASNLRYGNPDATDDELWQALETAQAREFVERMEGGLAAPVAQGGGNVSGGQRQRL
AIARALVRRPEIYLFDDSFSALDYATDAALRAALSRETDRATVVIVAQRVATIRGADRIVVLDEGRVVGTGTHTELMAGN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=676739 OIU91_RS18735 WP_329147899.1 4164620..4166353(-) (rcrP) [Streptomyces sp. NBC_01456]
GTGTTGGTCCGACTTGTACGGGGACATCTGCGGCCCCACAGACGCGCGATCTCCCTGATCGTGCTGCTCCAGCTGATCCA
GACGCTGGCCACCCTCTTTCTGCCCACCCTCAACGCCGACATCATCGACAACGGCGTGGTGAAGGGGGACACGGGCTACA
TCTTCGGCACCGGCGGCTTCATGATCGCCGTCACTCTGCTGCAGATCGTCTGCGCGATCGGTGCCGTCTACTTCGGTGCC
CGGACGGCCATGGCGCTCGGCCGGGACCTCCGCGCCGCGGTCTTCGACCGGGTGCAGTCCTTCTCCTCCCGGGAAGTGGG
CGCGTTCGGGGCGCCGTCGCTGATCACCCGCACCACCAATGACGTCCAGCAGGTCCAGATGCTGGTGCTGATGACGTTCA
CGATGATGGTCACGGCGCCGATCATGTGCATCGGCGGCGTGCTGATGGCGCTCAACCAGGACGTGCCGCTGTCCGGTCTG
CTGCTGGTCATCGTCCCGGTCCTGGGGGTGCTGATCTCCCTGATCGTGCGCCGGCTGCGCCCGCTCTTCCGCGGGGTGCA
GCAGCGCATCGACACCGTCAACCGCGTACTGCGCGAGCAGATCACCGGCATCCGCGTCATCCGCGCCTTCGTCCGCGACG
GCTACGAGCGCGAGCGGTTCGCCGGGGCGAACACCGATCTGTTCGAGGTGTCGCTGCGTTCCGGCCGGCTGATGTCGATG
ATGTTCCCGCTGGTCATGCTGATCGTGAACCTCTCCAGCGTGGCCGTCGTCTGGTTCGGCGGGCTGCGGATCGACGCCAA
CGACATGCAGATCGGCGCGCTGACGGCGTTCCTCAGCTACCTCATGTACATCCTGATGTCGATCATGATGGCGACGTTCA
TGGTGATGATGCTGCCGCGCGCGGAGGTCTGCGCCGAGCGCATCCAGGAGGTGCTGTCGACCGACTCCAGCGTCACCCCG
CCGGAAAACCCGGTCACCACGCTGCGCCGGCACGGCGAACTGGAGCTGCGCCACGTCGAGTTCCGCTTCCCCGGTGCCGA
GCAGCCGGTCCTCAAGGACATCTCGCTGATCGCCCGCCCGGGTGAGACCACCGCCGTCATCGGTTCGACGGGCTCCGGCA
AGTCGACCCTGCTGGGCCTCGTACCGCGGCTGTTCGACGCGACCGGCGGCGCGGTCCTGGTGGACGGCGAGGACGTCCGC
ACCCTCGACCACGAGACGCTGGCCCGGACCATAGGCCTGGTCCCGCAGAAGCCGTACCTCTTCTCCGGCACCGTCGCCAG
CAACCTGCGCTACGGCAACCCGGACGCCACCGACGACGAGCTGTGGCAGGCGCTGGAGACCGCCCAGGCGCGGGAGTTCG
TCGAGCGGATGGAGGGCGGGCTGGCGGCCCCCGTCGCGCAGGGCGGCGGCAATGTCTCCGGCGGTCAGCGGCAGCGGCTG
GCCATCGCGCGGGCGCTGGTGCGCCGTCCCGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTGGACTACGCGACGGA
CGCGGCGCTGCGGGCCGCGCTGTCCCGGGAGACCGACCGCGCGACGGTGGTGATCGTCGCCCAGCGGGTCGCCACGATCC
GCGGGGCCGACCGGATCGTCGTCCTGGACGAGGGCCGGGTCGTCGGCACCGGTACCCACACCGAGCTGATGGCCGGCAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.747

97.4

0.397