Detailed information NTG0676690

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG285_RS24170
• Genome accession: NZ_CP109450
• Coordinates: 5397169..5398461 (+)
• Length: 430 a.a.
• NCBI ID: WP_356825822.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01471
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5392169..5403461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG285_RS24140 (OG285_24115)	-	5393226..5393420 (+)	195	WP_356825828.1	hypothetical protein	-
OG285_RS24155 (OG285_24130)	tig	5393979..5395382 (+)	1404	WP_371792179.1	trigger factor	-
OG285_RS24160 (OG285_24135)	clpP	5395660..5396277 (+)	618	WP_356825824.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG285_RS24165 (OG285_24140)	clpP	5396329..5397012 (+)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG285_RS24170 (OG285_24145)	clpX	5397169..5398461 (+)	1293	WP_356825822.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG285_RS24175 (OG285_24150)	-	5398542..5399543 (-)	1002	WP_371792180.1	hypothetical protein	-
OG285_RS24180 (OG285_24155)	-	5399683..5402304 (+)	2622	WP_356825818.1	valine--tRNA ligase	-
OG285_RS24185 (OG285_24160)	-	5402391..5403404 (-)	1014	WP_356825816.1	rod shape-determining protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47088.85 Da
• Isoelectric Point: 4.7809

>NTDB_id=676690 OG285_RS24170 WP_356825822.1 5397169..5398461(+) (clpX) [Streptomyces sp. NBC_01471]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=676690 OG285_RS24170 WP_356825822.1 5397169..5398461(+) (clpX) [Streptomyces sp. NBC_01471]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTATGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCGCCAGCCG
CGAGGACGCAATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCCCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TCCTGAAGATCCTTGAGGGCACCACCGCCTCGGTGCCCCCGCAGGGTGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGAGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTTCCCGTCCTGACCTCGGTGCACAACCTGGACCGC
GAAGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCTCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTGCCGCGCGAGCCGCGGATCGTCGGCAACGACGGGCGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.524	93.721	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509