Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MUA78_RS01910 | Genome accession | NZ_CP095116 |
| Coordinates | 419138..419641 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain IVB6156 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 415079..437928 | 419138..419641 | within | 0 |
Gene organization within MGE regions
Location: 415079..437928
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA78_RS01880 (MUA78_01880) | - | 415079..415924 (+) | 846 | WP_001621659.1 | ParB/RepB/Spo0J family partition protein | - |
| MUA78_RS01885 (MUA78_01885) | - | 416078..416959 (+) | 882 | WP_262515314.1 | mechanosensitive ion channel family protein | - |
| MUA78_RS01890 (MUA78_01890) | - | 416989..417192 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| MUA78_RS01895 (MUA78_01895) | ychF | 417204..418300 (+) | 1097 | Protein_378 | redox-regulated ATPase YchF | - |
| MUA78_RS01900 (MUA78_01900) | - | 418386..418577 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| MUA78_RS01905 (MUA78_01905) | rpsF | 418821..419117 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| MUA78_RS01910 (MUA78_01910) | ssbA | 419138..419641 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| MUA78_RS01915 (MUA78_01915) | rpsR | 419693..419935 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| MUA78_RS01920 (MUA78_01920) | - | 420150..421139 (-) | 990 | WP_250425947.1 | Abi family protein | - |
| MUA78_RS01925 (MUA78_01925) | - | 421145..422359 (-) | 1215 | WP_262515315.1 | site-specific integrase | - |
| MUA78_RS01930 (MUA78_01930) | - | 422657..423391 (-) | 735 | WP_262515316.1 | helix-turn-helix domain-containing protein | - |
| MUA78_RS01935 (MUA78_01935) | - | 423541..423753 (+) | 213 | WP_001063623.1 | helix-turn-helix transcriptional regulator | - |
| MUA78_RS01940 (MUA78_01940) | - | 423754..424026 (+) | 273 | WP_001138303.1 | helix-turn-helix domain-containing protein | - |
| MUA78_RS01945 (MUA78_01945) | - | 424038..424184 (+) | 147 | WP_262515317.1 | pathogenicity island protein | - |
| MUA78_RS01950 (MUA78_01950) | tscA | 424177..424386 (+) | 210 | WP_262515318.1 | type II toxin-antitoxin system antitoxin TscA | - |
| MUA78_RS01955 (MUA78_01955) | tscT | 424389..424709 (+) | 321 | WP_262515319.1 | type II toxin-antitoxin system toxin TscT | - |
| MUA78_RS01960 (MUA78_01960) | - | 424780..427032 (+) | 2253 | WP_262515320.1 | phage/plasmid primase, P4 family | - |
| MUA78_RS01965 (MUA78_01965) | - | 427303..427647 (+) | 345 | WP_000567971.1 | hypothetical protein | - |
| MUA78_RS01970 (MUA78_01970) | - | 427649..428290 (+) | 642 | WP_262515321.1 | pathogenicity island protein | - |
| MUA78_RS01975 (MUA78_01975) | - | 428998..429342 (+) | 345 | WP_001288441.1 | hypothetical protein | - |
| MUA78_RS01980 (MUA78_01980) | - | 429377..429955 (+) | 579 | WP_031769358.1 | hypothetical protein | - |
| MUA78_RS01985 (MUA78_01985) | - | 429955..430131 (+) | 177 | WP_001160678.1 | hypothetical protein | - |
| MUA78_RS01990 (MUA78_01990) | - | 430184..430711 (+) | 528 | WP_262515322.1 | spore coat protein | - |
| MUA78_RS01995 (MUA78_01995) | - | 430843..431055 (+) | 213 | WP_262515478.1 | helix-turn-helix domain-containing protein | - |
| MUA78_RS02000 (MUA78_02000) | - | 431052..431621 (+) | 570 | WP_262515323.1 | terminase small subunit | - |
| MUA78_RS02005 (MUA78_02005) | - | 431856..432263 (-) | 408 | WP_045178629.1 | alkylhydroperoxidase | - |
| MUA78_RS02010 (MUA78_02010) | - | 432366..432779 (+) | 414 | WP_045178630.1 | Lrp/AsnC family transcriptional regulator | - |
| MUA78_RS02015 (MUA78_02015) | - | 433501..434508 (-) | 1008 | WP_001080631.1 | Abi family protein | - |
| MUA78_RS02020 (MUA78_02020) | - | 434514..435185 (-) | 672 | Protein_403 | tyrosine-type recombinase/integrase | - |
| MUA78_RS02025 (MUA78_02025) | selX | 435426..436037 (+) | 612 | WP_000475322.1 | staphylococcal enterotoxin-like toxin X | - |
| MUA78_RS02030 (MUA78_02030) | - | 436406..436774 (+) | 369 | WP_000849165.1 | YxeA family protein | - |
| MUA78_RS02035 (MUA78_02035) | - | 436955..437527 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| MUA78_RS02040 (MUA78_02040) | - | 437665..437928 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=675554 MUA78_RS01910 WP_000934799.1 419138..419641(+) (ssbA) [Staphylococcus aureus strain IVB6156]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=675554 MUA78_RS01910 WP_000934799.1 419138..419641(+) (ssbA) [Staphylococcus aureus strain IVB6156]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |