Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MUA55_RS02080 | Genome accession | NZ_CP095112 |
| Coordinates | 441315..441818 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain IVB6157 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 437255..461610 | 441315..441818 | within | 0 |
Gene organization within MGE regions
Location: 437255..461610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA55_RS02050 (MUA55_02060) | - | 437255..438100 (+) | 846 | WP_001573568.1 | ParB/RepB/Spo0J family partition protein | - |
| MUA55_RS02055 (MUA55_02065) | - | 438254..439135 (+) | 882 | WP_000373076.1 | mechanosensitive ion channel family protein | - |
| MUA55_RS02060 (MUA55_02070) | - | 439165..439368 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| MUA55_RS02065 (MUA55_02075) | ychF | 439380..440477 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| MUA55_RS02070 (MUA55_02080) | - | 440563..440754 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| MUA55_RS02075 (MUA55_02085) | rpsF | 440998..441294 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| MUA55_RS02080 (MUA55_02090) | ssbA | 441315..441818 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| MUA55_RS02085 (MUA55_02095) | rpsR | 441870..442112 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| MUA55_RS02090 (MUA55_02100) | - | 442351..443250 (-) | 900 | WP_045179037.1 | Abi family protein | - |
| MUA55_RS02095 (MUA55_02105) | - | 443252..444466 (-) | 1215 | WP_252559222.1 | tyrosine-type recombinase/integrase | - |
| MUA55_RS02100 (MUA55_02110) | - | 444920..445615 (-) | 696 | WP_000668212.1 | helix-turn-helix domain-containing protein | - |
| MUA55_RS02105 (MUA55_02115) | - | 445759..445971 (+) | 213 | WP_252559224.1 | helix-turn-helix domain-containing protein | - |
| MUA55_RS02110 (MUA55_02120) | - | 445972..446244 (+) | 273 | WP_262628349.1 | helix-turn-helix domain-containing protein | - |
| MUA55_RS02115 (MUA55_02125) | - | 446256..446411 (+) | 156 | WP_000784883.1 | hypothetical protein | - |
| MUA55_RS02120 (MUA55_02130) | - | 446396..446599 (+) | 204 | WP_001662724.1 | hypothetical protein | - |
| MUA55_RS02125 (MUA55_02135) | - | 446601..446984 (+) | 384 | WP_001663083.1 | hypothetical protein | - |
| MUA55_RS02130 (MUA55_02140) | tscT | 446985..447281 (+) | 297 | WP_162636130.1 | type II toxin-antitoxin system toxin TscT | - |
| MUA55_RS02135 (MUA55_02145) | - | 447356..448972 (+) | 1617 | WP_031922538.1 | hypothetical protein | - |
| MUA55_RS02140 (MUA55_02150) | - | 449148..449951 (+) | 804 | WP_252559229.1 | bifunctional DNA primase/polymerase | - |
| MUA55_RS02145 (MUA55_02155) | - | 449938..450210 (+) | 273 | WP_111762498.1 | pathogenicity island protein | - |
| MUA55_RS02150 (MUA55_02160) | - | 450212..450853 (+) | 642 | WP_262628351.1 | pathogenicity island protein | - |
| MUA55_RS02155 (MUA55_02165) | - | 451389..451730 (+) | 342 | WP_001190614.1 | hypothetical protein | - |
| MUA55_RS02160 (MUA55_02170) | - | 451742..452320 (+) | 579 | WP_070040342.1 | pathogenicity island protein | - |
| MUA55_RS02165 (MUA55_02175) | - | 452338..452556 (+) | 219 | WP_000853271.1 | capsid morphogenesis B protein | - |
| MUA55_RS02170 (MUA55_02180) | - | 452607..453134 (+) | 528 | WP_250396271.1 | spore coat protein | - |
| MUA55_RS02175 (MUA55_02185) | - | 453137..453478 (+) | 342 | WP_045178609.1 | hypothetical protein | - |
| MUA55_RS02180 (MUA55_02190) | - | 453475..454044 (+) | 570 | WP_001293074.1 | terminase small subunit | - |
| MUA55_RS02185 (MUA55_02195) | - | 454319..454489 (+) | 171 | WP_000022954.1 | VraH family peptide resistance protein | - |
| MUA55_RS14400 | - | 454992..455090 (+) | 99 | Protein_437 | hypothetical protein | - |
| MUA55_RS02190 (MUA55_02200) | - | 455311..456435 (+) | 1125 | WP_045178611.1 | SdrD B-like domain-containing protein | - |
| MUA55_RS02195 (MUA55_02205) | - | 457576..458583 (-) | 1008 | Protein_439 | Abi family protein | - |
| MUA55_RS02200 (MUA55_02210) | - | 458589..459303 (-) | 715 | Protein_440 | tyrosine-type recombinase/integrase | - |
| MUA55_RS02205 (MUA55_02215) | - | 459540..459908 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| MUA55_RS02210 (MUA55_02220) | - | 460089..460661 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| MUA55_RS02215 (MUA55_02225) | - | 460799..461062 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| MUA55_RS02220 (MUA55_02230) | - | 461356..461610 (+) | 255 | WP_000466746.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=675513 MUA55_RS02080 WP_000934799.1 441315..441818(+) (ssbA) [Staphylococcus aureus strain IVB6157]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=675513 MUA55_RS02080 WP_000934799.1 441315..441818(+) (ssbA) [Staphylococcus aureus strain IVB6157]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |