Detailed information NTG0674918

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB33_RS27310
• Genome accession: NZ_CP109365
• Coordinates: 6245052..6246338 (+)
• Length: 428 a.a.
• NCBI ID: WP_081221566.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01558
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6240052..6251338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB33_RS27280 (OHB33_27265)	-	6240756..6240950 (+)	195	WP_016435177.1	hypothetical protein	-
OHB33_RS27295 (OHB33_27280)	tig	6241680..6243065 (+)	1386	WP_164369328.1	trigger factor	-
OHB33_RS27300 (OHB33_27285)	clpP	6243488..6244093 (+)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB33_RS27305 (OHB33_27290)	clpP	6244211..6244891 (+)	681	WP_081217263.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB33_RS27310 (OHB33_27295)	clpX	6245052..6246338 (+)	1287	WP_081221566.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB33_RS27315 (OHB33_27300)	-	6246537..6246821 (+)	285	WP_266613689.1	hypothetical protein	-
OHB33_RS27320 (OHB33_27305)	-	6246922..6247914 (-)	993	WP_266848534.1	hypothetical protein	-
OHB33_RS27325 (OHB33_27310)	-	6248051..6250675 (+)	2625	WP_326843199.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46912.71 Da
• Isoelectric Point: 4.7360

>NTDB_id=674918 OHB33_RS27310 WP_081221566.1 6245052..6246338(+) (clpX) [Streptomyces sp. NBC_01558]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=674918 OHB33_RS27310 WP_081221566.1 6245052..6246338(+) (clpX) [Streptomyces sp. NBC_01558]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTCGGACAGGAGTCC
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCGCGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCGGGATATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGACGTCTCCGGTGAGGGTGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGAGCCTTCGCCGGCCTGGAGAAGCTCATCGAGTCGAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGGAGTCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGGCGTCTCCCGGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATTCTCGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGTGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGAGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCAGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCCAGGGACGCCCGCCGCGGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521