Detailed information NTG0673766

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB14_RS40605
• Genome accession: NZ_CP109303
• Coordinates: 8807498..8808787 (+)
• Length: 429 a.a.
• NCBI ID: WP_405872768.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01613
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 8802498..8813787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB14_RS40570 (OHB14_40535)	-	8803308..8803502 (+)	195	WP_016435177.1	hypothetical protein	-
OHB14_RS40575 (OHB14_40540)	-	8803492..8803617 (-)	126	WP_406445426.1	hypothetical protein	-
OHB14_RS40590 (OHB14_40555)	tig	8804242..8805639 (+)	1398	WP_406445428.1	trigger factor	-
OHB14_RS40595 (OHB14_40560)	clpP	8805977..8806585 (+)	609	WP_405877596.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB14_RS40600 (OHB14_40565)	clpP	8806636..8807316 (+)	681	WP_405872766.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB14_RS40605 (OHB14_40570)	clpX	8807498..8808787 (+)	1290	WP_405872768.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB14_RS40610 (OHB14_40575)	-	8808982..8809254 (+)	273	WP_405872770.1	hypothetical protein	-
OHB14_RS40615 (OHB14_40580)	-	8809342..8810313 (-)	972	WP_405872772.1	hypothetical protein	-
OHB14_RS40620 (OHB14_40585)	-	8810450..8813074 (+)	2625	WP_406445431.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46931.67 Da
• Isoelectric Point: 4.7809

>NTDB_id=673766 OHB14_RS40605 WP_405872768.1 8807498..8808787(+) (clpX) [Streptomyces sp. NBC_01613]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGNGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=673766 OHB14_RS40605 WP_405872768.1 8807498..8808787(+) (clpX) [Streptomyces sp. NBC_01613]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAGCCC
GCGAAGAAGGCCCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGCAACGGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTGGCCCAGA
CCCTGGCCCGGATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCTTCCATCACCCGCGACGTGTCGGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTCGAGGGTACGACGGCCTCGGTCCCGCCGCAGGGTGGTCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCTCGGGCCTGGAGAAGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGTCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCGAACGTCAACCCGACGCTGATCCCGCGGGACGCGCGCAACGGGCGGGGGCCGGGGGAGCAGAA
GACGGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	95.804	0.524