Detailed information NTG0673568

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH775_RS34050
• Genome accession: NZ_CP109301
• Coordinates: 7501249..7502535 (+)
• Length: 428 a.a.
• NCBI ID: WP_369259233.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01615
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7496249..7507535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH775_RS34020 (OH775_33960)	-	7496758..7497264 (+)	507	WP_406477806.1	hypothetical protein	-
OH775_RS34035 (OH775_33975)	tig	7497867..7499267 (+)	1401	WP_406477808.1	trigger factor	-
OH775_RS34040 (OH775_33980)	clpP	7499696..7500301 (+)	606	WP_327435020.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH775_RS34045 (OH775_33985)	clpP	7500408..7501088 (+)	681	WP_327428702.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH775_RS34050 (OH775_33990)	clpX	7501249..7502535 (+)	1287	WP_369259233.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH775_RS34055 (OH775_33995)	-	7502730..7503698 (-)	969	WP_406477811.1	hypothetical protein	-
OH775_RS34060 (OH775_34000)	-	7503835..7506459 (+)	2625	WP_406477813.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47000.79 Da
• Isoelectric Point: 4.8249

>NTDB_id=673568 OH775_RS34050 WP_369259233.1 7501249..7502535(+) (clpX) [Streptomyces sp. NBC_01615]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=673568 OH775_RS34050 WP_369259233.1 7501249..7502535(+) (clpX) [Streptomyces sp. NBC_01615]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCACGGGTCAAAACCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATTCTGCTGCTCGGCCCCACGGGTTCGGGCAAGACGCTCCTGGCCCAGA
CCCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTGGAGAACATCCTGCTCAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGCAAGAGCGAGAACCCGTCGATCACGCGGGATGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCGGGAGC
GAAGGGGATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAACTGCAGTCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACGTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTTCACTCGAACGTGAACCCGACGCTGATTCCGCGTGACGCTCGCCGCGGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521