Detailed information NTG0673239

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH768_RS34475
• Genome accession: NZ_CP109293
• Coordinates: 7446915..7448201 (+)
• Length: 428 a.a.
• NCBI ID: WP_406459858.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01622
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7441915..7453201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH768_RS34440 (OH768_34385)	-	7442446..7442640 (+)	195	WP_406459855.1	hypothetical protein	-
OH768_RS34445 (OH768_34390)	-	7442816..7443055 (+)	240	WP_406459856.1	hypothetical protein	-
OH768_RS34460 (OH768_34405)	tig	7443688..7445055 (+)	1368	WP_406459857.1	trigger factor	-
OH768_RS34465 (OH768_34410)	clpP	7445420..7446022 (+)	603	WP_043676731.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH768_RS34470 (OH768_34415)	clpP	7446073..7446753 (+)	681	WP_359612097.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH768_RS34475 (OH768_34420)	clpX	7446915..7448201 (+)	1287	WP_406459858.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH768_RS34480 (OH768_34425)	-	7448282..7449250 (-)	969	WP_406459859.1	hypothetical protein	-
OH768_RS34485 (OH768_34430)	-	7449386..7452010 (+)	2625	WP_406459860.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46840.65 Da
• Isoelectric Point: 4.7760

>NTDB_id=673239 OH768_RS34475 WP_406459858.1 7446915..7448201(+) (clpX) [Streptomyces sp. NBC_01622]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=673239 OH768_RS34475 WP_406459858.1 7446915..7448201(+) (clpX) [Streptomyces sp. NBC_01622]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGTTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCACTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCACAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTGGCTCGCAAGAGCGAGAACCCCTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCTCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGGGAGCTGCAGGCAAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGGCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCTCTCGAACGTCAACCCGACCCTCATCCCGCGCGACGCGCGCGGCCGGGGCCCGGGCGAGCAGAAGAC
GGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519