Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA27_RS07305 | Genome accession | NZ_CP094817 |
| Coordinates | 1437949..1438851 (+) | Length | 300 a.a. |
| NCBI ID | WP_096791887.1 | Uniprot ID | - |
| Organism | Mammaliicoccus sciuri strain IVB6230 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1432949..1443851
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA27_RS07265 (MUA27_07255) | - | 1433033..1433587 (+) | 555 | WP_096791884.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA27_RS07270 (MUA27_07260) | - | 1433588..1435036 (+) | 1449 | WP_096791885.1 | rhomboid family intramembrane serine protease | - |
| MUA27_RS07275 (MUA27_07265) | - | 1435041..1435232 (+) | 192 | WP_078099923.1 | YqgQ family protein | - |
| MUA27_RS07280 (MUA27_07270) | - | 1435229..1436200 (+) | 972 | WP_096791886.1 | ROK family glucokinase | - |
| MUA27_RS07285 (MUA27_07275) | - | 1436200..1436514 (+) | 315 | WP_058611614.1 | MTH1187 family thiamine-binding protein | - |
| MUA27_RS07290 (MUA27_07280) | - | 1436544..1436783 (-) | 240 | WP_016911885.1 | DUF2759 domain-containing protein | - |
| MUA27_RS07295 (MUA27_07285) | - | 1436881..1437513 (+) | 633 | WP_058611613.1 | MBL fold metallo-hydrolase | - |
| MUA27_RS07300 (MUA27_07290) | - | 1437547..1437795 (-) | 249 | WP_025904960.1 | DUF2626 family protein | - |
| MUA27_RS07305 (MUA27_07295) | comGA | 1437949..1438851 (+) | 903 | WP_096791887.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA27_RS07310 (MUA27_07300) | comGB | 1438841..1439881 (+) | 1041 | WP_096791888.1 | competence type IV pilus assembly protein ComGB | - |
| MUA27_RS07315 (MUA27_07305) | comGC | 1439896..1440213 (+) | 318 | WP_096791889.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA27_RS07320 (MUA27_07310) | - | 1440242..1440640 (+) | 399 | WP_049319406.1 | hypothetical protein | - |
| MUA27_RS07325 (MUA27_07315) | comGE | 1440627..1440905 (+) | 279 | WP_232196125.1 | competence type IV pilus minor pilin ComGE | - |
| MUA27_RS07330 (MUA27_07320) | - | 1440880..1441314 (+) | 435 | WP_096791891.1 | competence type IV pilus minor pilin ComGF | - |
| MUA27_RS07335 (MUA27_07325) | - | 1441549..1442037 (+) | 489 | WP_096791892.1 | shikimate kinase | - |
| MUA27_RS07340 (MUA27_07330) | gcvT | 1442230..1443318 (+) | 1089 | WP_058611608.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34419.32 Da Isoelectric Point: 6.1198
>NTDB_id=673230 MUA27_RS07305 WP_096791887.1 1437949..1438851(+) (comGA) [Mammaliicoccus sciuri strain IVB6230]
MEKLFKSIINDAINSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
MEKLFKSIINDAINSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGQYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
Nucleotide
Download Length: 903 bp
>NTDB_id=673230 MUA27_RS07305 WP_096791887.1 1437949..1438851(+) (comGA) [Mammaliicoccus sciuri strain IVB6230]
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTATCAATTCTAATGCGAGTGATATTCACTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGATTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTATCAATTCTAATGCGAGTGATATTCACTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGATTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCAATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
52.5 |
93.333 |
0.49 |
| comGA | Staphylococcus aureus N315 |
52.5 |
93.333 |
0.49 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
40.58 |
92 |
0.373 |
| pilB | Haemophilus influenzae Rd KW20 |
35.032 |
100 |
0.367 |