Detailed information NTG0673099

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB56_RS15095
• Genome accession: NZ_CP109277
• Coordinates: 3218318..3219604 (-)
• Length: 428 a.a.
• NCBI ID: WP_055570715.1
• Uniprot ID: A0ABZ1GMU6
• Organism: Streptomyces sp. NBC_01635
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3213318..3224604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB56_RS15085 (OHB56_15030)	-	3214502..3217150 (-)	2649	WP_406353788.1	valine--tRNA ligase	-
OHB56_RS15090 (OHB56_15035)	-	3217289..3218221 (+)	933	WP_326752746.1	hypothetical protein	-
OHB56_RS15095 (OHB56_15040)	clpX	3218318..3219604 (-)	1287	WP_055570715.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB56_RS15100 (OHB56_15045)	clpP	3219794..3220474 (-)	681	WP_055593250.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB56_RS15105 (OHB56_15050)	clpP	3220589..3221197 (-)	609	WP_055625632.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB56_RS15110 (OHB56_15055)	tig	3221591..3223027 (-)	1437	WP_326752747.1	trigger factor	-
OHB56_RS15125 (OHB56_15070)	-	3223569..3223763 (-)	195	WP_055593252.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46824.65 Da
• Isoelectric Point: 4.7788

>NTDB_id=673099 OHB56_RS15095 WP_055570715.1 3218318..3219604(-) (clpX) [Streptomyces sp. NBC_01635]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGAQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=673099 OHB56_RS15095 WP_055570715.1 3218318..3219604(-) (clpX) [Streptomyces sp. NBC_01635]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCCGAGACCA
GTGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTGGTCGGCCAGGAATCG
GCCAAGAAGGCCCTCTCCGTCGCCGTGTACAACCACTACAAGCGGGTCCAGGCGGGGGAGAACGGCGGCGCCCAGAGCCG
CGAGGACGCCATCGAGCTGGCGAAGTCCAACATCCTGCTGCTGGGTCCCACCGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCCACCGCCCTCACCGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGGACCACGGCGTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAAGGCCGGGCCGGCGC
CAAAGGCATCGGTTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCGGTCATCACCTCGGTCCACAATCTCGACCGC
GAGGCCCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCACTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGTTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTCCTCTCCAACGTCAACCCGACCCTGATCCCGCGCGACGCCCGCGGCCGCGGACCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.027	94.159	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523