Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MUA09_RS02085 | Genome accession | NZ_CP094789 |
| Coordinates | 441327..441830 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain IVB6167 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 437267..464105 | 441327..441830 | within | 0 |
Gene organization within MGE regions
Location: 437267..464105
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA09_RS02055 (MUA09_02050) | - | 437267..438112 (+) | 846 | WP_001573568.1 | ParB/RepB/Spo0J family partition protein | - |
| MUA09_RS02060 (MUA09_02055) | - | 438266..439147 (+) | 882 | WP_000373076.1 | mechanosensitive ion channel family protein | - |
| MUA09_RS02065 (MUA09_02060) | - | 439177..439380 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| MUA09_RS02070 (MUA09_02065) | ychF | 439392..440489 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| MUA09_RS02075 (MUA09_02070) | - | 440575..440766 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| MUA09_RS02080 (MUA09_02075) | rpsF | 441010..441306 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| MUA09_RS02085 (MUA09_02080) | ssbA | 441327..441830 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| MUA09_RS02090 (MUA09_02085) | rpsR | 441882..442124 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| MUA09_RS02095 (MUA09_02090) | - | 442363..443262 (-) | 900 | WP_045179037.1 | Abi family protein | - |
| MUA09_RS02100 (MUA09_02095) | - | 443264..443563 (-) | 300 | Protein_419 | tyrosine-type recombinase/integrase | - |
| MUA09_RS02105 (MUA09_02100) | - | 443594..445161 (+) | 1568 | WP_094409958.1 | IS3-like element ISSau2 family transposase | - |
| MUA09_RS02110 (MUA09_02105) | - | 445221..446141 (-) | 921 | Protein_421 | tyrosine-type recombinase/integrase | - |
| MUA09_RS02115 (MUA09_02110) | - | 446420..447091 (-) | 672 | WP_262543856.1 | helix-turn-helix domain-containing protein | - |
| MUA09_RS02120 (MUA09_02115) | - | 447072..447596 (-) | 525 | Protein_423 | SAP domain protein | - |
| MUA09_RS02125 (MUA09_02120) | - | 447623..448195 (-) | 573 | WP_001186980.1 | helix-turn-helix domain-containing protein | - |
| MUA09_RS02130 (MUA09_02125) | - | 448367..448588 (+) | 222 | WP_000560872.1 | helix-turn-helix transcriptional regulator | - |
| MUA09_RS02135 (MUA09_02130) | - | 448589..448861 (+) | 273 | WP_000124597.1 | helix-turn-helix domain-containing protein | - |
| MUA09_RS02140 (MUA09_02135) | - | 448873..449019 (+) | 147 | WP_000784893.1 | hypothetical protein | - |
| MUA09_RS02145 (MUA09_02140) | tscA | 449012..449221 (+) | 210 | WP_045178599.1 | type II toxin-antitoxin system antitoxin TscA | - |
| MUA09_RS02150 (MUA09_02145) | tscT | 449224..449550 (+) | 327 | WP_045178601.1 | type II toxin-antitoxin system toxin TscT | - |
| MUA09_RS02155 (MUA09_02150) | - | 449615..450484 (+) | 870 | WP_045178602.1 | primase alpha helix C-terminal domain-containing protein | - |
| MUA09_RS02160 (MUA09_02155) | - | 450498..452207 (+) | 1710 | Protein_431 | DUF927 domain-containing protein | - |
| MUA09_RS02165 (MUA09_02160) | - | 452518..452898 (+) | 381 | WP_000356932.1 | hypothetical protein | - |
| MUA09_RS02170 (MUA09_02165) | - | 452895..453536 (+) | 642 | WP_045178603.1 | pathogenicity island protein | - |
| MUA09_RS02175 (MUA09_02170) | - | 453884..454225 (+) | 342 | WP_001190600.1 | hypothetical protein | - |
| MUA09_RS02180 (MUA09_02175) | - | 454237..454815 (+) | 579 | WP_045178605.1 | hypothetical protein | - |
| MUA09_RS02185 (MUA09_02180) | - | 454833..455051 (+) | 219 | WP_000853271.1 | capsid morphogenesis B protein | - |
| MUA09_RS02190 (MUA09_02185) | - | 455102..455629 (+) | 528 | WP_250396271.1 | spore coat protein | - |
| MUA09_RS02195 (MUA09_02190) | - | 455632..455973 (+) | 342 | WP_045178609.1 | hypothetical protein | - |
| MUA09_RS02200 (MUA09_02195) | - | 455970..456539 (+) | 570 | WP_001293074.1 | terminase small subunit | - |
| MUA09_RS02205 (MUA09_02200) | - | 456814..456984 (+) | 171 | WP_000022954.1 | VraH family peptide resistance protein | - |
| MUA09_RS14840 | - | 457487..457585 (+) | 99 | Protein_441 | hypothetical protein | - |
| MUA09_RS02210 (MUA09_02205) | - | 457806..458930 (+) | 1125 | WP_045178611.1 | SdrD B-like domain-containing protein | - |
| MUA09_RS02215 (MUA09_02210) | - | 460071..461078 (-) | 1008 | WP_001080636.1 | Abi family protein | - |
| MUA09_RS02220 (MUA09_02215) | - | 461084..461798 (-) | 715 | Protein_444 | tyrosine-type recombinase/integrase | - |
| MUA09_RS02225 (MUA09_02220) | - | 462035..462403 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| MUA09_RS02230 (MUA09_02225) | - | 462584..463156 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| MUA09_RS02235 (MUA09_02230) | - | 463294..463557 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| MUA09_RS02240 (MUA09_02235) | - | 463851..464105 (+) | 255 | WP_000466746.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=672572 MUA09_RS02085 WP_000934799.1 441327..441830(+) (ssbA) [Staphylococcus aureus strain IVB6167]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=672572 MUA09_RS02085 WP_000934799.1 441327..441830(+) (ssbA) [Staphylococcus aureus strain IVB6167]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |