Detailed information NTG0672240

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIE74_RS26125
• Genome accession: NZ_CP109181
• Coordinates: 5922313..5923605 (+)
• Length: 430 a.a.
• NCBI ID: WP_078077342.1
• Uniprot ID: A0A1U9QXP1
• Organism: Streptomyces sp. NBC_01716
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5917313..5928605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE74_RS26095 (OIE74_26105)	-	5918301..5918495 (+)	195	WP_189107123.1	hypothetical protein	-
OIE74_RS26110 (OIE74_26120)	tig	5919101..5920537 (+)	1437	WP_329387674.1	trigger factor	-
OIE74_RS26115 (OIE74_26125)	clpP	5920816..5921421 (+)	606	WP_031231653.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE74_RS26120 (OIE74_26130)	clpP	5921475..5922158 (+)	684	WP_329387676.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE74_RS26125 (OIE74_26135)	clpX	5922313..5923605 (+)	1293	WP_078077342.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE74_RS26130 (OIE74_26140)	-	5923696..5924646 (-)	951	WP_329387678.1	hypothetical protein	-
OIE74_RS26135 (OIE74_26145)	-	5924783..5927404 (+)	2622	WP_329387680.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47023.93 Da
• Isoelectric Point: 4.8824

>NTDB_id=672240 OIE74_RS26125 WP_078077342.1 5922313..5923605(+) (clpX) [Streptomyces sp. NBC_01716]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQAP
AKKALSVAVYNHYKRVQAGENGGAGSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEESDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDLPALEAIADQAILRGTGARGLRAILEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=672240 OIE74_RS26125 WP_078077342.1 5922313..5923605(+) (clpX) [Streptomyces sp. NBC_01716]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTCTATATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGTGAGATCTACGAGTTCCTTGAGGGGTACGTCGTCGGGCAGGCGCCC
GCGAAGAAGGCGCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGTGAGAACGGCGGCGCCGGGAGCCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CGCTGGCCCGGATGCTGAACGTACCGTTCGCGATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATTTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCCCAAGGCGGCCGTAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCACGGGCCGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGAGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTGCACAACCTGGACCGC
GAAGCGCTCCTCAAGATCCTGGTCGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCTCCCCGCGCTCGAAGCCATCGCCGACCAGGCGATTCTGCGCGGCACGGGCGCGCGCGGTCTGC
GGGCGATCCTGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGAAGAACGACGGCCGCCACGA
GAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A1U9QXP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.268	93.721	0.602
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512