Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MUA35_RS01760 | Genome accession | NZ_CP094770 |
| Coordinates | 393316..393819 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain IVB6201 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 393316..415400 | 393316..393819 | within | 0 |
Gene organization within MGE regions
Location: 393316..415400
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA35_RS01760 (MUA35_01745) | ssbA | 393316..393819 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| MUA35_RS01765 (MUA35_01750) | rpsR | 393871..394113 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| MUA35_RS01770 (MUA35_01755) | - | 394327..395316 (-) | 990 | WP_250425947.1 | Abi family protein | - |
| MUA35_RS01775 (MUA35_01760) | - | 395322..396536 (-) | 1215 | WP_262607853.1 | site-specific integrase | - |
| MUA35_RS01780 (MUA35_01765) | - | 396540..397352 (-) | 813 | WP_049948385.1 | hypothetical protein | - |
| MUA35_RS01785 (MUA35_01770) | - | 397466..398161 (-) | 696 | WP_031903008.1 | helix-turn-helix domain-containing protein | - |
| MUA35_RS01790 (MUA35_01775) | - | 398306..398518 (+) | 213 | WP_000608987.1 | helix-turn-helix transcriptional regulator | - |
| MUA35_RS01795 (MUA35_01780) | - | 398551..398823 (+) | 273 | WP_262607854.1 | helix-turn-helix domain-containing protein | - |
| MUA35_RS01800 (MUA35_01785) | - | 398835..398981 (+) | 147 | WP_000784875.1 | hypothetical protein | - |
| MUA35_RS01805 (MUA35_01790) | tscA | 398974..399183 (+) | 210 | WP_001058486.1 | type II toxin-antitoxin system antitoxin TscA | - |
| MUA35_RS01810 (MUA35_01795) | tscT | 399186..399485 (+) | 300 | WP_001103943.1 | type II toxin-antitoxin system toxin TscT | - |
| MUA35_RS01815 (MUA35_01800) | - | 399560..401176 (+) | 1617 | WP_103144518.1 | phage resistance protein | - |
| MUA35_RS01820 (MUA35_01805) | - | 401352..402155 (+) | 804 | WP_196251784.1 | bifunctional DNA primase/polymerase | - |
| MUA35_RS01825 (MUA35_01810) | - | 402142..402414 (+) | 273 | WP_001149387.1 | hypothetical protein | - |
| MUA35_RS01830 (MUA35_01815) | - | 402416..403057 (+) | 642 | WP_262607855.1 | pathogenicity island protein | - |
| MUA35_RS01835 (MUA35_01820) | - | 403447..403788 (+) | 342 | WP_001161492.1 | hypothetical protein | - |
| MUA35_RS01840 (MUA35_01825) | - | 403800..404378 (+) | 579 | WP_000846290.1 | hypothetical protein | - |
| MUA35_RS01845 (MUA35_01830) | - | 404396..404614 (+) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| MUA35_RS01850 (MUA35_01835) | - | 404665..405192 (+) | 528 | WP_001836980.1 | spore coat protein | - |
| MUA35_RS01855 | - | 405195..405323 (+) | 129 | WP_046400696.1 | hypothetical protein | - |
| MUA35_RS01860 (MUA35_01840) | - | 405324..405536 (+) | 213 | WP_025174984.1 | hypothetical protein | - |
| MUA35_RS01865 (MUA35_01845) | - | 405533..406102 (+) | 570 | WP_262607856.1 | terminase small subunit | - |
| MUA35_RS01870 (MUA35_01850) | tst | 406257..406961 (-) | 705 | WP_262607857.1 | toxic shock syndrome toxin TSST-1 | - |
| MUA35_RS01875 (MUA35_01855) | - | 407421..407771 (+) | 351 | WP_262537525.1 | pathogenicity island protein | - |
| MUA35_RS01880 (MUA35_01860) | - | 407890..408402 (+) | 513 | WP_262607858.1 | hypothetical protein | - |
| MUA35_RS01885 (MUA35_01865) | - | 408418..408600 (+) | 183 | WP_262537520.1 | hypothetical protein | - |
| MUA35_RS01890 (MUA35_01870) | - | 409072..409797 (+) | 726 | WP_262537518.1 | CPBP family intramembrane glutamic endopeptidase | - |
| MUA35_RS01895 (MUA35_01875) | - | 410449..411456 (-) | 1008 | WP_262537515.1 | Abi family protein | - |
| MUA35_RS01900 (MUA35_01880) | - | 411462..412144 (-) | 683 | Protein_376 | tyrosine-type recombinase/integrase | - |
| MUA35_RS01905 (MUA35_01885) | selX | 412350..412961 (+) | 612 | WP_262537512.1 | staphylococcal enterotoxin-like toxin X | - |
| MUA35_RS01910 (MUA35_01890) | - | 413330..413698 (+) | 369 | WP_262607859.1 | YxeA family protein | - |
| MUA35_RS01915 (MUA35_01895) | - | 413879..414451 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| MUA35_RS01920 (MUA35_01900) | - | 414589..414852 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| MUA35_RS01925 (MUA35_01905) | - | 415146..415400 (+) | 255 | WP_000466742.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=672192 MUA35_RS01760 WP_000934799.1 393316..393819(+) (ssbA) [Staphylococcus aureus strain IVB6201]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=672192 MUA35_RS01760 WP_000934799.1 393316..393819(+) (ssbA) [Staphylococcus aureus strain IVB6201]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |