Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MUA94_RS12120 | Genome accession | NZ_CP094768 |
| Coordinates | 2410681..2411184 (-) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain IVB6202 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2389019..2415244 | 2410681..2411184 | within | 0 |
Gene organization within MGE regions
Location: 2389019..2415244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA94_RS11955 (MUA94_11935) | - | 2389019..2389273 (-) | 255 | WP_000466742.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| MUA94_RS11960 (MUA94_11940) | - | 2389567..2389830 (+) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| MUA94_RS11965 (MUA94_11945) | - | 2389968..2390540 (-) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| MUA94_RS11970 (MUA94_11950) | - | 2390719..2391087 (-) | 369 | WP_262537509.1 | YxeA family protein | - |
| MUA94_RS11975 (MUA94_11955) | selX | 2391456..2392067 (-) | 612 | WP_262537512.1 | staphylococcal enterotoxin-like toxin X | - |
| MUA94_RS11980 (MUA94_11960) | - | 2392273..2392955 (+) | 683 | Protein_2317 | tyrosine-type recombinase/integrase | - |
| MUA94_RS11985 (MUA94_11965) | - | 2392961..2393968 (+) | 1008 | WP_262537515.1 | Abi family protein | - |
| MUA94_RS11990 (MUA94_11970) | - | 2394620..2395345 (-) | 726 | WP_262537518.1 | CPBP family intramembrane glutamic endopeptidase | - |
| MUA94_RS11995 (MUA94_11975) | - | 2395817..2395999 (-) | 183 | WP_262537520.1 | hypothetical protein | - |
| MUA94_RS12000 (MUA94_11980) | - | 2396015..2396527 (-) | 513 | WP_000813313.1 | hypothetical protein | - |
| MUA94_RS12005 (MUA94_11985) | - | 2396646..2396996 (-) | 351 | WP_262537525.1 | pathogenicity island protein | - |
| MUA94_RS12010 (MUA94_11990) | tst | 2397456..2398160 (+) | 705 | WP_262537528.1 | toxic shock syndrome toxin TSST-1 | - |
| MUA94_RS12015 (MUA94_11995) | - | 2398315..2398884 (-) | 570 | WP_070007275.1 | terminase small subunit | - |
| MUA94_RS12020 (MUA94_12000) | - | 2398881..2399222 (-) | 342 | WP_262537532.1 | pathogenicity island protein | - |
| MUA94_RS12025 (MUA94_12005) | - | 2399225..2399752 (-) | 528 | WP_001836980.1 | spore coat protein | - |
| MUA94_RS12030 (MUA94_12010) | - | 2399803..2400021 (-) | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| MUA94_RS12035 (MUA94_12015) | - | 2400039..2400617 (-) | 579 | Protein_2328 | pathogenicity island protein | - |
| MUA94_RS12040 (MUA94_12020) | - | 2400629..2400970 (-) | 342 | WP_001161492.1 | hypothetical protein | - |
| MUA94_RS12045 (MUA94_12025) | - | 2401360..2402001 (-) | 642 | WP_262537536.1 | pathogenicity island protein | - |
| MUA94_RS12050 (MUA94_12030) | - | 2401998..2402282 (-) | 285 | WP_262537540.1 | pathogenicity island protein | - |
| MUA94_RS12055 (MUA94_12035) | - | 2402284..2402651 (-) | 368 | Protein_2332 | pathogenicity island protein | - |
| MUA94_RS12060 (MUA94_12040) | - | 2402952..2404409 (-) | 1458 | WP_262537542.1 | virulence-associated E family protein | - |
| MUA94_RS12065 (MUA94_12045) | - | 2404426..2405295 (-) | 870 | WP_262538822.1 | primase alpha helix C-terminal domain-containing protein | - |
| MUA94_RS12070 (MUA94_12050) | tscT | 2405362..2405679 (-) | 318 | WP_262537544.1 | type II toxin-antitoxin system toxin TscT | - |
| MUA94_RS12075 (MUA94_12055) | - | 2405680..2406063 (-) | 384 | WP_262537546.1 | pathogenicity island protein | - |
| MUA94_RS12080 (MUA94_12060) | - | 2406065..2406268 (-) | 204 | WP_232043922.1 | pathogenicity island protein | - |
| MUA94_RS12085 (MUA94_12065) | - | 2406253..2406408 (-) | 156 | WP_162665232.1 | pathogenicity island protein | - |
| MUA94_RS12090 (MUA94_12070) | - | 2406420..2406692 (-) | 273 | WP_262537557.1 | helix-turn-helix domain-containing protein | - |
| MUA94_RS12095 (MUA94_12075) | - | 2406693..2406905 (-) | 213 | WP_262537560.1 | helix-turn-helix transcriptional regulator | - |
| MUA94_RS12100 (MUA94_12080) | - | 2406977..2407702 (+) | 726 | WP_262537562.1 | helix-turn-helix domain-containing protein | - |
| MUA94_RS12105 (MUA94_12085) | - | 2407965..2409178 (+) | 1214 | Protein_2342 | tyrosine-type recombinase/integrase | - |
| MUA94_RS12110 (MUA94_12090) | - | 2409184..2410173 (+) | 990 | WP_250425947.1 | Abi family protein | - |
| MUA94_RS12115 (MUA94_12095) | rpsR | 2410387..2410629 (-) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| MUA94_RS12120 (MUA94_12100) | ssbA | 2410681..2411184 (-) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| MUA94_RS12125 (MUA94_12105) | rpsF | 2411205..2411501 (-) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| MUA94_RS12130 (MUA94_12110) | - | 2411745..2411936 (+) | 192 | WP_001052483.1 | hypothetical protein | - |
| MUA94_RS12135 (MUA94_12115) | ychF | 2412022..2413119 (-) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| MUA94_RS12140 (MUA94_12120) | - | 2413131..2413334 (-) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| MUA94_RS12145 (MUA94_12125) | - | 2413364..2414245 (-) | 882 | WP_229374250.1 | mechanosensitive ion channel family protein | - |
| MUA94_RS12150 (MUA94_12130) | - | 2414399..2415244 (-) | 846 | WP_063650645.1 | ParB/RepB/Spo0J family partition protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=672189 MUA94_RS12120 WP_000934799.1 2410681..2411184(-) (ssbA) [Staphylococcus aureus strain IVB6202]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=672189 MUA94_RS12120 WP_000934799.1 2410681..2411184(-) (ssbA) [Staphylococcus aureus strain IVB6202]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |