Detailed information NTG0671558

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG966_RS13910
• Genome accession: NZ_CP109137
• Coordinates: 3092014..3093297 (-)
• Length: 427 a.a.
• NCBI ID: WP_326649910.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01750
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3087014..3098297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG966_RS13900 (OG966_13930)	-	3088179..3090800 (-)	2622	WP_326649908.1	valine--tRNA ligase	-
OG966_RS13905 (OG966_13935)	-	3090937..3091938 (+)	1002	WP_326649909.1	hypothetical protein	-
OG966_RS13910 (OG966_13940)	clpX	3092014..3093297 (-)	1284	WP_326649910.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG966_RS13915 (OG966_13945)	clpP	3093443..3094126 (-)	684	WP_326649911.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG966_RS13920 (OG966_13950)	clpP	3094184..3094789 (-)	606	WP_326655196.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG966_RS13925 (OG966_13955)	tig	3095030..3096424 (-)	1395	WP_326649913.1	trigger factor	-
OG966_RS13940 (OG966_13970)	-	3097120..3097614 (-)	495	WP_326649914.1	RICIN domain-containing protein	-
OG966_RS13945 (OG966_13975)	-	3098022..3098216 (-)	195	WP_215097656.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46701.55 Da
• Isoelectric Point: 4.8752

>NTDB_id=671558 OG966_RS13910 WP_326649910.1 3092014..3093297(-) (clpX) [Streptomyces sp. NBC_01750]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHNNVNPTLVPRIVKNDGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=671558 OG966_RS13910 WP_326649910.1 3092014..3093297(-) (clpX) [Streptomyces sp. NBC_01750]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCAGAGACCT
CCGAAGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTTCAGGCCGGCGAGAACGGCGGTGGCGCGGGCCG
GGACGACGCGATCGAACTGGCCAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CGCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAAGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAAAACCCGTCGATCACCCGGGATGTGTCGGGCGAAGGCGTCCAGCAGGCAC
TGCTGAAGATCCTGGAAGGCACGACGGCCTCCGTCCCGCCGCAGGGCGGCCGGAAGCATCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTACTGACCTCGGTCCACAATTTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTGGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTGGACGGCGT
GGAGCTGGACTTCGAGCGCGGGGCACTCGAGGCCATCGCGGACCAGGCGATCCTGCGCCAGACGGGCGCGCGTGGTCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTGCACAACAACGTGAACCCGACGCTGGTGCCGCGGATCGTGAAGAACGACGGCCGCCACGAGAAGTCCGC
GTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	94.145	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.253	0.518