Detailed information NTG0670757

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIE49_RS13010
• Genome accession: NZ_CP109090
• Coordinates: 2825371..2826657 (-)
• Length: 428 a.a.
• NCBI ID: WP_100566838.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01788
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2820371..2831657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE49_RS13000 (OIE49_13015)	-	2821590..2824220 (-)	2631	WP_326802450.1	valine--tRNA ligase	-
OIE49_RS13005 (OIE49_13020)	-	2824358..2825311 (+)	954	WP_326802451.1	hypothetical protein	-
OIE49_RS13010 (OIE49_13025)	clpX	2825371..2826657 (-)	1287	WP_100566838.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE49_RS13015 (OIE49_13030)	clpP	2826817..2827497 (-)	681	WP_326802452.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE49_RS13020 (OIE49_13035)	clpP	2827626..2828231 (-)	606	WP_199836507.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE49_RS13025 (OIE49_13040)	tig	2828480..2829856 (-)	1377	WP_100566835.1	trigger factor	-
OIE49_RS13040 (OIE49_13055)	-	2830528..2831127 (-)	600	WP_326802453.1	HD domain-containing protein	-
OIE49_RS13045 (OIE49_13060)	-	2831200..2831394 (-)	195	WP_326802454.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46737.57 Da
• Isoelectric Point: 4.7790

>NTDB_id=670757 OIE49_RS13010 WP_100566838.1 2825371..2826657(-) (clpX) [Streptomyces sp. NBC_01788]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLDGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIRSKRELETKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=670757 OIE49_RS13010 WP_100566838.1 2825371..2826657(-) (clpX) [Streptomyces sp. NBC_01788]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCGGAGACCA
GCGAGGTGCGTTGGGAGGAACTGCCCAAGCCCCGCGAGATCTACGAGTTCCTGGACGGGTACGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGGCATCGAACTCGCCAAGTCCAACATCCTTCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTGCTGGCCCAGA
CACTGGCCCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCCACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCCTCCATCACCCGCGATGTCTCGGGCGAGGGTGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGGACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGCTGGAGACCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTGAAGATCCTCGTCGAACCGCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTGCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCCGACGTCGTCCTCTCCAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGCGGCCGCGGTCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.988	96.028	0.528