Detailed information NTG0670433

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MMY79_RS14960
• Genome accession: NZ_CP094657
• Coordinates: 3231171..3232289 (+)
• Length: 372 a.a.
• NCBI ID: WP_252609857.1
• Uniprot ID: -
• Organism: Acinetobacter sp. XS-4
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3226171..3237289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MMY79_RS14945 (MMY79_14940)	-	3228345..3229187 (-)	843	WP_252609853.1	undecaprenyl-diphosphate phosphatase	-
MMY79_RS14950 (MMY79_14945)	-	3229295..3229987 (-)	693	WP_252609855.1	YggS family pyridoxal phosphate-dependent enzyme	-
MMY79_RS14955 (MMY79_14950)	pilT	3230114..3231151 (+)	1038	WP_003653239.1	type IV pilus twitching motility protein PilT	Machinery gene
MMY79_RS14960 (MMY79_14955)	pilU	3231171..3232289 (+)	1119	WP_252609857.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MMY79_RS14965 (MMY79_14960)	fur	3232359..3232796 (-)	438	WP_004794120.1	ferric iron uptake transcriptional regulator	-
MMY79_RS14970 (MMY79_14965)	bamE	3232908..3233306 (+)	399	WP_252609864.1	outer membrane protein assembly factor BamE	-
MMY79_RS14975 (MMY79_14970)	-	3233371..3233685 (-)	315	WP_252609865.1	RnfH family protein	-
MMY79_RS14980 (MMY79_14975)	-	3233685..3234752 (-)	1068	WP_252609866.1	hypothetical protein	-
MMY79_RS14985 (MMY79_14980)	-	3234904..3235359 (-)	456	WP_013198763.1	bacteriohemerythrin	-
MMY79_RS14990 (MMY79_14985)	-	3235611..3236459 (-)	849	WP_252609867.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41863.03 Da
• Isoelectric Point: 6.6400

>NTDB_id=670433 MMY79_RS14960 WP_252609857.1 3231171..3232289(+) (pilU) [Acinetobacter sp. XS-4]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGDVIGQLLHSIMSEKQRKEFADTRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPSVLKDLSMTKRGIIIFVGATGTGKSTSLASMISYRNHNTKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLAEEGPDQIAGTNQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=670433 MMY79_RS14960 WP_252609857.1 3231171..3232289(+) (pilU) [Acinetobacter sp. XS-4]
ATGGATTTTAATGACTTACTCAACCTCATGGTTGAAAAAAAATCATCCGATCTTTTTATTACAGATGGTGTTGCGCCATC
TATGAAGATTAACGGACAAATTGTTCCAATTTCAAAAAATAGTCTTTCAGGGGATGTTATTGGTCAACTCTTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAATTTTGCCATTATGAACCGTGATAAAACTGCC
CGCTTTCGTGTGAGCGCTTTTCAGCAGCGTGACATGCCTGGCATGGTGCTACGTCGAATTGAAACTAAAATTCCTTCAAT
TGATGACTTGCAGTTACCATCTGTTCTTAAAGATTTATCAATGACCAAACGCGGCATCATTATTTTTGTTGGTGCGACAG
GTACAGGTAAATCGACGTCTTTGGCTTCAATGATTAGCTATCGTAACCACAACACTAAAGGTCATATCATTACCATTGAA
GACCCAATCGAGTTTATTCACGAACATGCGGGCTGCATCATTACCCAACGTGAAGTCGGAATTGATACGGACTCATTTGA
AATTGCCTTAAAAAATACTTTGCGACAAGCACCAGATGTCATCTTGATTGGTGAGATTCGATCTCGTGAAGTAATGGACT
ACGCGATTGGCTTTGCTGAAACAGGTCACCTTGTATTAGCCACAATGCACGCCAACAACGCTAACCAAGCACTCGACCGT
ATCATTCACTTCTTTGAAAGTGACCGCCACAGTCAGCTCTACATGGACTTATCTCTTAACTTAAAGGCCATGATTGCTCA
GCAACTTATTCCAACACCTGATGGCAATTCTCGCCGCGCCGCAATTGAAATTTTAATTAACTCACCATTAATTTCTGATT
ACATTCGTAAAGGTGAAATTCATGAAATTAAAGATTTAATGAAACGCTCACGTGAACTCGGTATGCAAACCTTTGACCAA
GCATTGTTTGATCTCTATAAAGCAGGCCAAATTACCTACAAAGATGCATTAAAACATGCCGACTCACCAAATGATTTACG
TTTGACAATTAAGCTTGCTGAAGAAGGACCTGATCAAATTGCAGGCACAAATCAGCATTTAACCTTCGACCGACAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (33-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	74.868	100	0.761
pilU	Pseudomonas stutzeri DSM 10701	67.655	99.731	0.675
pilU	Vibrio cholerae strain A1552	54.054	99.462	0.538
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.908	93.011	0.39