Detailed information NTG0670348

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG430_RS31550
• Genome accession: NZ_CP109055
• Coordinates: 7123250..7124536 (+)
• Length: 428 a.a.
• NCBI ID: WP_327356031.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01304
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7118250..7129536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG430_RS31535 (OG430_31530)	tig	7119398..7120783 (+)	1386	WP_327356029.1	trigger factor	-
OG430_RS31540 (OG430_31535)	clpP	7121711..7122316 (+)	606	WP_327359302.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG430_RS31545 (OG430_31540)	clpP	7122363..7123049 (+)	687	WP_327356030.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG430_RS31550 (OG430_31545)	clpX	7123250..7124536 (+)	1287	WP_327356031.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG430_RS31555 (OG430_31550)	-	7124651..7125673 (-)	1023	WP_327356032.1	hypothetical protein	-
OG430_RS31560 (OG430_31555)	-	7125775..7126755 (-)	981	WP_327356033.1	hypothetical protein	-
OG430_RS31565 (OG430_31560)	-	7126893..7129526 (+)	2634	WP_327356034.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46903.74 Da
• Isoelectric Point: 4.7896

>NTDB_id=670348 OG430_RS31550 WP_327356031.1 7123250..7124536(+) (clpX) [Streptomyces sp. NBC_01304]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEGRAGAKGIGFGATIRSKRELEEKDQFEDVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFDRDALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIS
ADVVRSNVNPTLVPRIVGKKDGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=670348 OG430_RS31550 WP_327356031.1 7123250..7124536(+) (clpX) [Streptomyces sp. NBC_01304]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGACCCGGTGTATACATCTGCGACGAGTGCATCGACCTCTGTAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGAGAGAACGGCGGGGGCCAAGGGCG
TGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTGCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCCCTCACCGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAAACCGGAATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAAAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTACAGCAGGCCC
TGTTGAAGATCCTCGAGGGCACGACCGCCTCGGTCCCCCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAATTCATCCAG
ATCGACACCACGAACGTCCTCTTCATCGTCGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGGGCCGCGCGGGTGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGCTCGAGGAGAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAATTCATCGGCCGCCTGCCCGTCCTCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGATCGAGCCGCGCAACGCACTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGAGTTCGACCGCGACGCCCTCGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCTCG
GCGGACGTCGTCCGCTCGAACGTGAACCCGACGCTGGTCCCGCGCATCGTGGGCAAGAAGGACGGACCGCACGAGAAGAG
CGCGTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516