Detailed information NTG0670177

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG826_RS28835
• Genome accession: NZ_CP109041
• Coordinates: 6459552..6460838 (+)
• Length: 428 a.a.
• NCBI ID: WP_266758728.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00645
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6454552..6465838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG826_RS28805 (OG826_28815)	-	6454969..6455484 (+)	516	WP_266758734.1	hypothetical protein	-
OG826_RS28820 (OG826_28830)	tig	6456182..6457567 (+)	1386	WP_266758732.1	trigger factor	-
OG826_RS28825 (OG826_28835)	clpP	6457987..6458592 (+)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG826_RS28830 (OG826_28840)	clpP	6458711..6459391 (+)	681	WP_266758730.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG826_RS28835 (OG826_28845)	clpX	6459552..6460838 (+)	1287	WP_266758728.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG826_RS28840 (OG826_28850)	-	6461092..6462054 (-)	963	WP_406366527.1	hypothetical protein	-
OG826_RS28845 (OG826_28855)	-	6462191..6464842 (+)	2652	WP_266758724.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46997.82 Da
• Isoelectric Point: 4.7847

>NTDB_id=670177 OG826_RS28835 WP_266758728.1 6459552..6460838(+) (clpX) [Streptomyces sp. NBC_00645]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=670177 OG826_RS28835 WP_266758728.1 6459552..6460838(+) (clpX) [Streptomyces sp. NBC_00645]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGTCAGGAGTCG
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCGCGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGTTCCGGCAAGACGCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCTCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGATGTGTCCGGCGAGGGCGTGCAGCAGGCTC
TCCTGAAGATCCTCGAGGGCACGACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCTCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGAGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAGGTTCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGAGGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGGGGCCGGGGCCCGGGGGAGCAGAAGAC
GGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521