Detailed information
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MQE20_RS01035 | Genome accession | NZ_CP094283 |
| Coordinates | 235072..235653 (+) | Length | 193 a.a. |
| NCBI ID | WP_001215082.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NY5301 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 230072..240653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MQE20_RS01010 (MQE20_01010) | - | 230693..231046 (+) | 354 | WP_000580165.1 | DUF1304 domain-containing protein | - |
| MQE20_RS01015 (MQE20_01015) | - | 231099..231440 (+) | 342 | WP_000263326.1 | GlpM family protein | - |
| MQE20_RS01020 (MQE20_01020) | tenA | 231490..232164 (-) | 675 | WP_000899418.1 | thiaminase II | - |
| MQE20_RS01025 (MQE20_01025) | - | 232427..233509 (+) | 1083 | WP_000680210.1 | DUF475 domain-containing protein | - |
| MQE20_RS01030 (MQE20_01030) | - | 233656..235020 (+) | 1365 | WP_000980460.1 | MFS transporter | - |
| MQE20_RS01035 (MQE20_01035) | ssb | 235072..235653 (+) | 582 | WP_001215082.1 | single-stranded DNA-binding protein | Machinery gene |
| MQE20_RS01040 (MQE20_01040) | - | 235694..236017 (-) | 324 | WP_000082712.1 | AzlD domain-containing protein | - |
| MQE20_RS01045 (MQE20_01045) | - | 236014..236709 (-) | 696 | WP_000431603.1 | AzlC family ABC transporter permease | - |
| MQE20_RS01050 (MQE20_01050) | - | 236778..237326 (+) | 549 | WP_000081859.1 | XRE family transcriptional regulator | - |
| MQE20_RS01055 (MQE20_01055) | - | 237632..239074 (+) | 1443 | WP_000718865.1 | amino acid permease | - |
| MQE20_RS01060 (MQE20_01060) | - | 239139..240638 (-) | 1500 | WP_001257168.1 | PLP-dependent aminotransferase family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20965.80 Da Isoelectric Point: 6.4822
>NTDB_id=668572 MQE20_RS01035 WP_001215082.1 235072..235653(+) (ssb) [Acinetobacter baumannii strain NY5301]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNTGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNTGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=668572 MQE20_RS01035 WP_001215082.1 235072..235653(+) (ssb) [Acinetobacter baumannii strain NY5301]
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAAGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACACTGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTTGCCCCTAAAGCACCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAAGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGTCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACACTGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTTGCCCCTAAAGCACCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.485 |
100 |
0.539 |
| ssb | Vibrio cholerae strain A1552 |
44.221 |
100 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
38.579 |
100 |
0.394 |
| ssb | Neisseria gonorrhoeae MS11 |
38.579 |
100 |
0.394 |