Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MOW14_RS13280 | Genome accession | NZ_CP094258 |
| Coordinates | 2770276..2770842 (-) | Length | 188 a.a. |
| NCBI ID | WP_075175360.1 | Uniprot ID | A0A6C0XYQ8 |
| Organism | Acinetobacter indicus strain BDT201 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 2738966..2779210 | 2770276..2770842 | within | 0 |
Gene organization within MGE regions
Location: 2738966..2779210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MOW14_RS13135 (MOW14_13135) | - | 2738966..2740291 (-) | 1326 | WP_163169897.1 | ISNCY family transposase | - |
| MOW14_RS13140 (MOW14_13140) | - | 2740622..2741416 (+) | 795 | WP_242898113.1 | MipA/OmpV family protein | - |
| MOW14_RS13145 (MOW14_13145) | - | 2741722..2742288 (-) | 567 | WP_000678311.1 | recombinase family protein | - |
| MOW14_RS13150 (MOW14_13150) | - | 2742475..2743374 (-) | 900 | WP_177156119.1 | cation diffusion facilitator family transporter | - |
| MOW14_RS13155 (MOW14_13155) | - | 2743461..2746601 (-) | 3141 | WP_096902762.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| MOW14_RS13160 (MOW14_13160) | - | 2746591..2747820 (-) | 1230 | WP_016658777.1 | efflux RND transporter periplasmic adaptor subunit | - |
| MOW14_RS13165 (MOW14_13165) | - | 2747822..2749147 (-) | 1326 | WP_035269736.1 | TolC family protein | - |
| MOW14_RS13170 (MOW14_13170) | - | 2749196..2749612 (-) | 417 | WP_227591103.1 | cation efflux protein, CzcI-like | - |
| MOW14_RS13175 (MOW14_13175) | - | 2749899..2750111 (-) | 213 | Protein_2535 | transposase | - |
| MOW14_RS13185 (MOW14_13185) | - | 2751401..2751820 (-) | 420 | Protein_2537 | DDE-type integrase/transposase/recombinase | - |
| MOW14_RS13190 (MOW14_13190) | - | 2751890..2752594 (+) | 705 | WP_001067784.1 | IS6-like element IS1006 family transposase | - |
| MOW14_RS13195 (MOW14_13195) | - | 2752647..2752796 (-) | 150 | Protein_2539 | IS5/IS1182 family transposase | - |
| MOW14_RS13200 (MOW14_13200) | - | 2752888..2753628 (-) | 741 | WP_180057733.1 | SprT family zinc-dependent metalloprotease | - |
| MOW14_RS13205 (MOW14_13205) | - | 2753630..2756911 (-) | 3282 | WP_242898114.1 | type I restriction endonuclease subunit R | - |
| MOW14_RS13210 (MOW14_13210) | - | 2756927..2757535 (-) | 609 | WP_242898115.1 | SLATT domain-containing protein | - |
| MOW14_RS13215 (MOW14_13215) | - | 2757538..2758842 (-) | 1305 | WP_242898116.1 | nucleotidyltransferase | - |
| MOW14_RS13220 (MOW14_13220) | - | 2758960..2759898 (-) | 939 | WP_242898117.1 | endonuclease NucS domain-containing protein | - |
| MOW14_RS13225 (MOW14_13225) | - | 2759898..2761088 (-) | 1191 | WP_242898118.1 | restriction endonuclease subunit S | - |
| MOW14_RS13230 (MOW14_13230) | - | 2761078..2762601 (-) | 1524 | WP_242898119.1 | type I restriction-modification system subunit M | - |
| MOW14_RS13235 (MOW14_13235) | - | 2762601..2763221 (-) | 621 | WP_242898120.1 | restriction endonuclease subunit S | - |
| MOW14_RS13240 (MOW14_13240) | - | 2763268..2763558 (-) | 291 | WP_242898121.1 | hypothetical protein | - |
| MOW14_RS13245 (MOW14_13245) | - | 2763824..2764030 (-) | 207 | WP_168542752.1 | helix-turn-helix transcriptional regulator | - |
| MOW14_RS13250 (MOW14_13250) | - | 2764127..2764606 (+) | 480 | WP_180057752.1 | hypothetical protein | - |
| MOW14_RS13255 (MOW14_13255) | - | 2764809..2765225 (-) | 417 | WP_168542628.1 | hypothetical protein | - |
| MOW14_RS15030 | - | 2765227..2767352 (-) | 2126 | Protein_2552 | integrase | - |
| MOW14_RS13270 (MOW14_13270) | - | 2767345..2768901 (-) | 1557 | WP_180006638.1 | site-specific integrase | - |
| MOW14_RS13275 (MOW14_13275) | - | 2768894..2770120 (-) | 1227 | WP_180006639.1 | site-specific integrase | - |
| MOW14_RS13280 (MOW14_13280) | ssb | 2770276..2770842 (-) | 567 | WP_075175360.1 | single-stranded DNA-binding protein | Machinery gene |
| MOW14_RS13285 (MOW14_13285) | - | 2770894..2772258 (-) | 1365 | WP_104483896.1 | MFS transporter | - |
| MOW14_RS13290 (MOW14_13290) | - | 2772411..2773493 (-) | 1083 | WP_005180731.1 | DUF475 domain-containing protein | - |
| MOW14_RS13295 (MOW14_13295) | tenA | 2773761..2774438 (+) | 678 | WP_168417077.1 | thiaminase II | - |
| MOW14_RS13300 (MOW14_13300) | uvrA | 2774689..2777520 (+) | 2832 | WP_180006640.1 | excinuclease ABC subunit UvrA | - |
| MOW14_RS13305 (MOW14_13305) | - | 2777549..2779210 (-) | 1662 | WP_180006641.1 | P-loop NTPase fold protein | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20670.41 Da Isoelectric Point: 6.4819
>NTDB_id=668443 MOW14_RS13280 WP_075175360.1 2770276..2770842(-) (ssb) [Acinetobacter indicus strain BDT201]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDAWTDKTTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQSEQGDNGFSQPRFNNNQGGGYSNNNQGGYAPQAQGGFNNNNAGGGY
GNQGGYQQPKPAPAATPAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDAWTDKTTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQSEQGDNGFSQPRFNNNQGGGYSNNNQGGYAPQAQGGFNNNNAGGGY
GNQGGYQQPKPAPAATPAPADLDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=668443 MOW14_RS13280 WP_075175360.1 2770276..2770842(-) (ssb) [Acinetobacter indicus strain BDT201]
ATGCGTGGTGTAAATAAGGTCATTTTAGTTGGTACTTTAGGTCGAGATCCAGAAACAAAAACTTTCCCGAATGGTGGCTC
GCTTACTCAATTTTCCATTGCCACCAGTGATGCGTGGACCGATAAAACCACCGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGCTGCATAACCGTTTAGGTGAAATCGCGCAGCAATACTTACGCAAAGGTTCAAAAGTCTATATTGAAGGT
TCATTGCGTACCCGTCAGTGGACCGATCAGAATGGTCAGGAACGCTACACCACAGAAATTCGTGGCGAGCAAATGCAGAT
GCTGGACTCTGGTCGTCAGCAAAGTGAGCAGGGCGATAATGGTTTTAGTCAGCCACGTTTTAACAATAACCAGGGCGGTG
GTTATAGCAATAACAACCAGGGTGGCTATGCGCCGCAAGCTCAAGGCGGTTTTAACAACAATAATGCCGGTGGTGGTTAT
GGCAACCAGGGTGGTTATCAGCAACCGAAACCAGCTCCTGCTGCAACGCCTGCACCGGCAGATTTGGATGATGACTTACC
GTTCTAG
ATGCGTGGTGTAAATAAGGTCATTTTAGTTGGTACTTTAGGTCGAGATCCAGAAACAAAAACTTTCCCGAATGGTGGCTC
GCTTACTCAATTTTCCATTGCCACCAGTGATGCGTGGACCGATAAAACCACCGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGCTGCATAACCGTTTAGGTGAAATCGCGCAGCAATACTTACGCAAAGGTTCAAAAGTCTATATTGAAGGT
TCATTGCGTACCCGTCAGTGGACCGATCAGAATGGTCAGGAACGCTACACCACAGAAATTCGTGGCGAGCAAATGCAGAT
GCTGGACTCTGGTCGTCAGCAAAGTGAGCAGGGCGATAATGGTTTTAGTCAGCCACGTTTTAACAATAACCAGGGCGGTG
GTTATAGCAATAACAACCAGGGTGGCTATGCGCCGCAAGCTCAAGGCGGTTTTAACAACAATAATGCCGGTGGTGGTTAT
GGCAACCAGGGTGGTTATCAGCAACCGAAACCAGCTCCTGCTGCAACGCCTGCACCGGCAGATTTGGATGATGACTTACC
GTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52.577 |
100 |
0.543 |
| ssb | Vibrio cholerae strain A1552 |
43.939 |
100 |
0.463 |
| ssb | Neisseria meningitidis MC58 |
38.421 |
100 |
0.388 |
| ssb | Neisseria gonorrhoeae MS11 |
38.421 |
100 |
0.388 |