Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   MOW14_RS04530 Genome accession   NZ_CP094258
Coordinates   948957..951395 (+) Length   812 a.a.
NCBI ID   WP_242898200.1    Uniprot ID   -
Organism   Acinetobacter indicus strain BDT201     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 943957..956395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS04505 (MOW14_04505) - 945020..945487 (+) 468 WP_005176559.1 YaiI/YqxD family protein -
  MOW14_RS04510 (MOW14_04510) - 945493..946416 (+) 924 WP_104471252.1 EamA family transporter -
  MOW14_RS04515 (MOW14_04515) - 946404..946970 (-) 567 WP_005176561.1 PilZ domain-containing protein -
  MOW14_RS04520 (MOW14_04520) - 946996..948231 (+) 1236 WP_005176562.1 lipoprotein-releasing ABC transporter permease subunit -
  MOW14_RS04525 (MOW14_04525) lolD 948224..948907 (+) 684 WP_005176563.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  MOW14_RS04530 (MOW14_04530) comA/comEC 948957..951395 (+) 2439 WP_242898200.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MOW14_RS04535 (MOW14_04535) - 951392..952333 (-) 942 WP_160243428.1 lysophospholipid acyltransferase family protein -
  MOW14_RS04540 (MOW14_04540) sppA 952464..953489 (+) 1026 WP_016660002.1 signal peptide peptidase SppA -
  MOW14_RS04545 (MOW14_04545) - 953486..954289 (+) 804 WP_160243427.1 alpha/beta hydrolase -
  MOW14_RS04550 (MOW14_04550) purN 954366..954995 (-) 630 WP_016660003.1 phosphoribosylglycinamide formyltransferase -
  MOW14_RS04555 (MOW14_04555) purM 955002..956072 (-) 1071 WP_005176576.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 812 a.a.        Molecular weight: 92914.16 Da        Isoelectric Point: 7.6735

>NTDB_id=668420 MOW14_RS04530 WP_242898200.1 948957..951395(+) (comA/comEC) [Acinetobacter indicus strain BDT201]
MLAQNKNKTENDMFKIMGAGWILGIACMGKTLWPMLDFPLWLSGLLLIILLLQQIAALHWSHLGIQLINTCVAFVITFLL
GLNFAQNQLQERLIFRELTRQPAEVVVYVQQINQLGSSQLRQPVQVLNRHSQPVQWLALLPAEQELQLGRYYRLQGQTLP
AHSFAVPGAFDVEQWYLQQNIMSGFQVQSIVELTESELYRLGFGAHLRQHQQLWPQFKLWIETQRLQIRDFIQQQALQHP
GLILALLTGDKSLLDEATEQQFQRFGMSHLLAISGPHVLIFAAMLCFVLQRLVTRYWPELYAQLPRSYLLLLPFMGCVFV
YCAYVGFEIPALRTLLICLVAGACLLLKQPIQPLSLLIGSASLLLLLDPLSVLSAAFWLSYGACFVLLRIYQTLRQQPVH
PQQTLMQKLWQGFRLLFESQWKIFIALFPLMIIFFKQIAWIAPLSNLLAIPWIGLVTVPLDILAGLSFYLAEPLSQLLFQ
LNDLALSLLLGCLQLLDLLFVPQLIPVALSPPMLLSLVLGLMILFLPAGLVPKAWSALCLLPLLFQDQFSRQVELSVLDV
GQGQAIFLRYREHSMMIDMGGHYDEQKWSIGRQIIQPFLSVKGVQQLDYLWLTHLDQDHSGAYQTLKPQLQVQQVYANAQ
LEVHPDSRFDYCRQGQQWQWQPGIQIQVLSPKPEQLNPVEQQKNESSCVLLVEFAQAQPYSRFLLMGDAGWPTEYQLLQD
YPDLKVDVLVLGHHGSRHSSSYQFLKQLEPKLAIASAGLNNRYGHPSTQVKARLNALKIPLWQTAQQGSIQFYPTENEVL
PYRHMRVWLRRD

Nucleotide


Download         Length: 2439 bp        

>NTDB_id=668420 MOW14_RS04530 WP_242898200.1 948957..951395(+) (comA/comEC) [Acinetobacter indicus strain BDT201]
ATGCTTGCTCAAAATAAAAATAAGACAGAAAACGACATGTTCAAAATCATGGGTGCCGGCTGGATTTTAGGCATTGCCTG
TATGGGCAAAACGCTATGGCCGATGCTGGATTTCCCGCTCTGGTTGTCAGGCCTGTTACTGATTATCCTGCTTTTACAGC
AAATAGCTGCTTTACATTGGTCCCATCTGGGCATCCAATTGATTAATACCTGTGTGGCATTTGTCATTACATTTTTGTTG
GGGCTGAATTTTGCCCAAAACCAGTTGCAAGAGCGGTTGATATTTCGTGAACTGACCCGCCAGCCGGCAGAGGTGGTGGT
CTATGTCCAGCAAATCAATCAGCTGGGTAGCAGCCAGCTCCGGCAACCGGTTCAGGTGCTGAACCGGCATAGCCAGCCGG
TGCAATGGCTGGCCTTGCTGCCGGCTGAACAGGAACTACAGCTGGGGCGTTATTATCGTTTACAGGGGCAGACCTTGCCG
GCGCACAGTTTTGCCGTTCCGGGTGCGTTTGATGTAGAGCAGTGGTATCTCCAGCAAAATATCATGAGCGGCTTTCAGGT
CCAGTCGATTGTGGAACTGACTGAATCGGAACTGTATCGGCTGGGATTTGGGGCACATTTAAGACAGCATCAGCAACTCT
GGCCGCAATTTAAATTGTGGATCGAAACACAGCGTTTACAGATTCGTGACTTTATCCAGCAGCAGGCATTGCAGCATCCC
GGCTTAATACTGGCACTGCTGACTGGCGATAAAAGTTTACTCGATGAAGCCACCGAGCAGCAGTTTCAGCGTTTCGGGAT
GAGTCATTTGCTGGCGATTTCCGGGCCGCATGTGCTGATTTTTGCCGCCATGCTGTGTTTTGTGCTGCAGCGCCTGGTCA
CTCGCTATTGGCCCGAATTATATGCGCAATTGCCCCGAAGTTATCTGCTGTTGCTGCCGTTTATGGGCTGTGTATTTGTA
TATTGTGCCTATGTTGGGTTTGAAATTCCTGCGCTCAGGACTTTACTGATTTGTCTGGTGGCAGGCGCCTGCCTGTTGCT
AAAGCAGCCGATACAGCCGCTGTCTTTGCTGATTGGTAGTGCTTCGTTATTGCTGCTGCTTGATCCGTTGAGTGTGCTGT
CGGCGGCATTCTGGCTGTCTTATGGCGCCTGCTTTGTGCTGTTAAGGATTTACCAGACCCTCCGGCAACAACCGGTGCAT
CCGCAGCAGACGTTGATGCAGAAATTGTGGCAGGGCTTCCGGCTGTTATTTGAATCGCAATGGAAAATTTTTATTGCGCT
GTTTCCGCTGATGATCATCTTCTTCAAGCAGATTGCCTGGATTGCGCCGCTGAGTAATCTATTGGCCATTCCCTGGATCG
GTCTGGTGACTGTACCGCTGGATATTCTGGCCGGTTTAAGTTTTTATCTGGCGGAACCGCTGAGCCAGTTGCTGTTTCAG
CTCAATGACTTGGCGCTAAGTCTGTTATTGGGTTGTTTGCAGTTGCTGGATTTGCTGTTTGTGCCGCAACTGATTCCGGT
TGCGCTGAGCCCACCGATGCTGCTGAGTCTGGTGCTGGGACTGATGATTTTATTTCTTCCCGCAGGTCTAGTGCCTAAAG
CCTGGTCAGCGCTGTGCTTGTTGCCTTTGCTGTTTCAGGATCAGTTTTCTCGGCAGGTGGAACTTAGTGTGCTGGATGTT
GGGCAAGGGCAGGCGATCTTTTTACGCTATCGTGAACACAGTATGATGATTGATATGGGCGGTCATTATGATGAACAGAA
ATGGAGTATCGGCCGGCAGATTATCCAGCCCTTTTTAAGTGTCAAAGGCGTGCAGCAGTTAGATTATTTATGGTTGACCC
ATCTGGATCAGGATCATAGCGGTGCCTATCAGACCTTAAAGCCACAGTTGCAGGTGCAACAGGTCTATGCCAATGCTCAG
CTTGAGGTACATCCGGACAGTCGCTTTGACTATTGCCGGCAGGGACAGCAATGGCAGTGGCAACCGGGCATCCAGATACA
GGTACTCTCTCCGAAACCGGAGCAGTTAAATCCTGTAGAACAGCAGAAAAATGAAAGTTCCTGTGTGCTGCTGGTTGAGT
TTGCACAGGCTCAGCCTTATTCACGCTTTTTATTGATGGGCGATGCAGGCTGGCCGACTGAATATCAGTTATTACAGGAT
TATCCGGATTTAAAAGTGGATGTGCTGGTGCTTGGCCATCATGGTAGCCGGCACAGTTCATCTTACCAGTTTTTAAAACA
GCTGGAGCCTAAACTGGCAATTGCATCGGCGGGGCTGAATAACCGTTATGGCCATCCGAGCACGCAGGTAAAAGCCCGAC
TGAACGCCTTAAAAATTCCCTTATGGCAGACCGCGCAGCAGGGTAGCATCCAGTTTTATCCCACTGAGAATGAGGTGCTA
CCGTATCGGCATATGCGGGTTTGGCTGCGGCGTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

47.917

100

0.482

  comA/comEC Acinetobacter baylyi ADP1

48.089

99.877

0.48

  comA/comEC Acinetobacter baumannii strain A118

47.426

100

0.477


Multiple sequence alignment