Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilL   Type   Machinery gene
Locus tag   MON37_RS05645 Genome accession   NZ_CP094242
Coordinates   1231784..1232275 (+) Length   163 a.a.
NCBI ID   WP_039405037.1    Uniprot ID   A0A0C1H3F5
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1226784..1237275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS05620 (MON37_05620) dnaB 1227238..1228644 (+) 1407 WP_039405025.1 replicative DNA helicase -
  MON37_RS05625 (MON37_05625) pilH 1228802..1229494 (+) 693 WP_039405028.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  MON37_RS05630 (MON37_05630) pilV 1229507..1230184 (+) 678 WP_203026359.1 type IV pilus modification protein PilV -
  MON37_RS05635 (MON37_05635) - 1230184..1231161 (+) 978 WP_039405031.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  MON37_RS05640 (MON37_05640) pilK 1231140..1231766 (+) 627 WP_039405035.1 pilus assembly protein Machinery gene
  MON37_RS05645 (MON37_05645) pilL 1231784..1232275 (+) 492 WP_039405037.1 PilX family type IV pilin Machinery gene
  MON37_RS05650 (MON37_05650) - 1232466..1233269 (-) 804 WP_082013575.1 IS3 family transposase -
  MON37_RS05655 (MON37_05655) - 1233310..1234102 (+) 793 WP_234403659.1 IS5 family transposase -
  MON37_RS05660 (MON37_05660) - 1234111..1234461 (-) 351 WP_242883805.1 helix-turn-helix domain-containing protein -
  MON37_RS05665 (MON37_05665) - 1234621..1235586 (+) 966 WP_242883537.1 IS30 family transposase -
  MON37_RS05670 (MON37_05670) - 1235794..1236801 (-) 1008 Protein_1102 IS5 family transposase -

Sequence


Protein


Download         Length: 163 a.a.        Molecular weight: 17985.61 Da        Isoelectric Point: 9.3401

>NTDB_id=668351 MON37_RS05645 WP_039405037.1 1231784..1232275(+) (pilL) [Morococcus cerebrosus strain CIP 81.93]
MNTSITKSQGFTLVEMLIVVAIIGILSTIAYPSYIRYIERGYQSQAHTELLAINNALKTELVKNPTLKIKDEIEGDTGLV
KTYKAAPEVAAKYDFSGEMKNKDAKNSRAYYLFATPKTGTDYKLSVWMDSLGNAYKCTDAESAKAKLTSKNGNTGCEQVG
YKK

Nucleotide


Download         Length: 492 bp        

>NTDB_id=668351 MON37_RS05645 WP_039405037.1 1231784..1232275(+) (pilL) [Morococcus cerebrosus strain CIP 81.93]
ATGAATACGTCTATCACTAAATCTCAAGGGTTTACGCTGGTTGAGATGCTGATTGTTGTTGCCATTATTGGCATCCTCAG
TACCATCGCTTACCCTTCCTATATCCGATACATCGAACGTGGCTACCAATCCCAAGCACATACGGAACTGCTTGCTATTA
ACAATGCCTTAAAAACCGAATTAGTCAAAAATCCTACCCTTAAAATAAAAGATGAAATTGAGGGAGATACGGGATTGGTT
AAGACCTACAAAGCTGCGCCCGAGGTCGCTGCCAAATACGACTTCAGCGGTGAAATGAAAAATAAGGACGCTAAAAATAG
CAGGGCTTATTATCTTTTTGCTACTCCGAAAACCGGTACTGATTACAAACTTTCCGTTTGGATGGATAGTTTGGGCAATG
CCTATAAATGTACTGATGCAGAATCGGCTAAAGCCAAGTTAACAAGCAAAAACGGCAATACAGGCTGTGAACAGGTAGGT
TACAAGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C1H3F5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilL Neisseria gonorrhoeae MS11

50

99.387

0.497

  pilX Neisseria meningitidis 8013

49.375

98.16

0.485


Multiple sequence alignment