Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilK   Type   Machinery gene
Locus tag   MON37_RS05640 Genome accession   NZ_CP094242
Coordinates   1231140..1231766 (+) Length   208 a.a.
NCBI ID   WP_039405035.1    Uniprot ID   A0A0C1EL74
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1226140..1236766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS05610 (MON37_05610) - 1226203..1226322 (+) 120 Protein_1090 IS5/IS1182 family transposase -
  MON37_RS05615 (MON37_05615) - 1226487..1227068 (-) 582 WP_003777725.1 superoxide dismutase -
  MON37_RS05620 (MON37_05620) dnaB 1227238..1228644 (+) 1407 WP_039405025.1 replicative DNA helicase -
  MON37_RS05625 (MON37_05625) pilH 1228802..1229494 (+) 693 WP_039405028.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  MON37_RS05630 (MON37_05630) pilV 1229507..1230184 (+) 678 WP_203026359.1 type IV pilus modification protein PilV -
  MON37_RS05635 (MON37_05635) - 1230184..1231161 (+) 978 WP_039405031.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  MON37_RS05640 (MON37_05640) pilK 1231140..1231766 (+) 627 WP_039405035.1 pilus assembly protein Machinery gene
  MON37_RS05645 (MON37_05645) pilL 1231784..1232275 (+) 492 WP_039405037.1 PilX family type IV pilin Machinery gene
  MON37_RS05650 (MON37_05650) - 1232466..1233269 (-) 804 WP_082013575.1 IS3 family transposase -
  MON37_RS05655 (MON37_05655) - 1233310..1234102 (+) 793 WP_234403659.1 IS5 family transposase -
  MON37_RS05660 (MON37_05660) - 1234111..1234461 (-) 351 WP_242883805.1 helix-turn-helix domain-containing protein -
  MON37_RS05665 (MON37_05665) - 1234621..1235586 (+) 966 WP_242883537.1 IS30 family transposase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 22829.72 Da        Isoelectric Point: 7.6875

>NTDB_id=668350 MON37_RS05640 WP_039405035.1 1231140..1231766(+) (pilK) [Morococcus cerebrosus strain CIP 81.93]
MRRPITLNHPAKASAQKGFALFIVLMIMIVIALLVVTATQSYNTEQRISTNDADHKFATTLAEAALREGENNIYEIEDGD
YPFTDDCISISKTKKDKKNGLCKAAQVNAGSYSTSAGTITVSGTSKDEAWIREDGCIDTHNKAKTKCIDVNGMQYPGKNS
GAAKDARYIIEYLSTNSTDNRTIYRVTAKAWGKNENTVVILQSYVANE

Nucleotide


Download         Length: 627 bp        

>NTDB_id=668350 MON37_RS05640 WP_039405035.1 1231140..1231766(+) (pilK) [Morococcus cerebrosus strain CIP 81.93]
ATGCGCAGACCGATTACTCTAAACCATCCTGCTAAAGCCTCTGCACAAAAGGGCTTTGCATTGTTCATCGTCCTGATGAT
CATGATCGTCATCGCCTTGCTCGTCGTTACCGCGACCCAGTCCTACAATACCGAGCAGCGAATCAGTACTAACGATGCCG
ACCACAAGTTTGCTACCACGCTTGCGGAAGCAGCATTGCGTGAAGGTGAGAATAATATTTACGAAATTGAGGATGGGGAC
TACCCGTTTACTGATGATTGTATTTCGATCTCGAAAACTAAAAAAGACAAAAAAAACGGTTTATGCAAAGCGGCACAAGT
TAATGCAGGTTCATATTCCACTTCCGCAGGCACGATTACTGTCAGTGGTACTTCAAAAGATGAAGCATGGATTCGAGAAG
ATGGTTGTATTGACACGCACAATAAGGCAAAAACAAAATGTATCGATGTAAACGGTATGCAATACCCTGGTAAAAATAGT
GGGGCTGCAAAAGATGCGCGTTATATCATCGAATACCTAAGCACCAATTCTACCGACAACCGTACCATTTACCGCGTTAC
CGCCAAAGCATGGGGAAAAAACGAAAATACGGTGGTTATACTACAATCTTATGTGGCCAACGAATAA

Domains

Predicted by InterproScan.

PilX N-terminal (PilX_N)

(17-67)

Type IV pilus assembly protein PilX C-term (PilX)

(99-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C1EL74

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilK Neisseria gonorrhoeae MS11

48.357

100

0.495

Multiple sequence alignment