Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilH   Type   Machinery gene
Locus tag   MON37_RS05625 Genome accession   NZ_CP094242
Coordinates   1228802..1229494 (+) Length   230 a.a.
NCBI ID   WP_039405028.1    Uniprot ID   A0A0C1H5F2
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1223802..1234494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS05600 (MON37_05600) - 1224132..1224326 (-) 195 WP_039405018.1 hypothetical protein -
  MON37_RS05605 (MON37_05605) - 1224426..1226054 (+) 1629 WP_039405020.1 ABC-F family ATPase -
  MON37_RS05610 (MON37_05610) - 1226203..1226322 (+) 120 Protein_1090 IS5/IS1182 family transposase -
  MON37_RS05615 (MON37_05615) - 1226487..1227068 (-) 582 WP_003777725.1 superoxide dismutase -
  MON37_RS05620 (MON37_05620) dnaB 1227238..1228644 (+) 1407 WP_039405025.1 replicative DNA helicase -
  MON37_RS05625 (MON37_05625) pilH 1228802..1229494 (+) 693 WP_039405028.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  MON37_RS05630 (MON37_05630) pilV 1229507..1230184 (+) 678 WP_203026359.1 type IV pilus modification protein PilV -
  MON37_RS05635 (MON37_05635) - 1230184..1231161 (+) 978 WP_039405031.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  MON37_RS05640 (MON37_05640) pilK 1231140..1231766 (+) 627 WP_039405035.1 pilus assembly protein Machinery gene
  MON37_RS05645 (MON37_05645) pilL 1231784..1232275 (+) 492 WP_039405037.1 PilX family type IV pilin Machinery gene
  MON37_RS05650 (MON37_05650) - 1232466..1233269 (-) 804 WP_082013575.1 IS3 family transposase -
  MON37_RS05655 (MON37_05655) - 1233310..1234102 (+) 793 WP_234403659.1 IS5 family transposase -
  MON37_RS05660 (MON37_05660) - 1234111..1234461 (-) 351 WP_242883805.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 230 a.a.        Molecular weight: 25150.46 Da        Isoelectric Point: 7.6895

>NTDB_id=668349 MON37_RS05625 WP_039405028.1 1228802..1229494(+) (pilH) [Morococcus cerebrosus strain CIP 81.93]
MYAQQKGFTLIELLVVIAITAIMATIALPNMSEWIASRRAASQAEQVANLLRFARAEAVRLNLPVYVCPVKVRKHGLADG
KCDSSQKSSGLLAYADKNRDKAYENDTSDISLRSIVLNGTDPAKVSHTFQHVAFGKDNADDGEAVFWSFMPNGTFGYTAS
KTLDKSTTFKYADGYIKISMTDSAATTEETKKSRASIVLIDSSGRVEICAKSDSRPLCQYSESQSPEPKE

Nucleotide


Download         Length: 693 bp        

>NTDB_id=668349 MON37_RS05625 WP_039405028.1 1228802..1229494(+) (pilH) [Morococcus cerebrosus strain CIP 81.93]
ATGTACGCACAACAAAAAGGTTTTACCTTAATCGAATTGTTGGTCGTGATCGCTATTACCGCCATCATGGCCACTATCGC
CCTTCCCAATATGAGCGAATGGATTGCCTCACGCCGTGCTGCCAGTCAGGCAGAGCAGGTGGCAAACCTCTTGCGTTTCG
CGCGAGCCGAAGCAGTCCGTCTCAATCTCCCTGTCTATGTCTGTCCCGTAAAAGTTAGAAAACACGGCCTGGCTGACGGC
AAATGCGACAGCAGCCAAAAAAGCAGCGGCCTGCTCGCCTATGCCGATAAAAACCGGGACAAAGCCTATGAGAATGACAC
AAGCGATATCTCCCTGCGCTCCATAGTCCTCAACGGTACCGACCCTGCCAAAGTTTCCCATACATTCCAACACGTCGCAT
TTGGAAAAGATAATGCCGATGACGGTGAGGCCGTATTTTGGTCATTTATGCCCAACGGCACATTCGGCTATACCGCCTCT
AAAACACTGGATAAATCAACAACTTTCAAATACGCCGACGGCTACATCAAAATCAGCATGACCGATTCCGCCGCAACGAC
CGAAGAAACCAAAAAATCCCGCGCCAGTATCGTCCTTATCGACAGCAGCGGTCGCGTCGAAATCTGCGCCAAATCAGATT
CGCGCCCCCTCTGCCAATATTCAGAATCTCAAAGTCCCGAACCCAAAGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(4-28)

Type II transport protein GspH (GspH)

(43-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C1H5F2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilH Neisseria gonorrhoeae MS11

57.604

94.348

0.543

Multiple sequence alignment